CN181890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 2.497e-51 Identity = 96/148 (64.86%), Postives = 111/148 (75.00%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAVAVL GT V+G V+ +Q+ GPTTV+ ++GL PGPHGFH+H GDTTNGC+STGPHFNP HG PEDE RHA G A T+VDNQIPL+GPNS++GRA VVH DDLGKGGHELS TTGNAGGR+ACG+IGL Sbjct: 66 KAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.337e-49 Identity = 92/148 (62.16%), Postives = 112/148 (75.68%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAV+VL GT V+G V+ +Q+ +GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA G A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 52 KAVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.207e-49 Identity = 94/148 (63.51%), Postives = 109/148 (73.65%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAVAVL G V+G V+ SQ+ DGPTTV+ ++GL PG HGFH+H GDTTNGCMSTG HFNP HG P DE RHA G A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 67 KAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 214
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.207e-49 Identity = 95/151 (62.91%), Postives = 109/151 (72.19%), Query Frame = -2 Query: 171 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 623 ++KAVAV+ G VKG++ F Q+ G T V G ++GL PG HGFH+HALGDTTNGC STGPHFNP K+HG P D RHA G A +V D QIPLSG +SI+GRAVVVHAD DDLG+ GHELSKTTGNAG RV CGIIGLQ Sbjct: 3 VIKAVAVINGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHADQDDLGRTGHELSKTTGNAGARVRCGIIGLQ 153
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.801e-49 Identity = 93/148 (62.84%), Postives = 109/148 (73.65%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAVAVL GT V+G V+ +Q+ GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA G A T+VD QIPLSGPNS++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 61 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 208
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.882e-49 Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAVAVL G V+G V+ +QE + PTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA G A T+VDNQIPL+GPNS+IGRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 52 KAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.852e-46 Identity = 89/137 (64.96%), Postives = 102/137 (74.45%), Query Frame = -2 Query: 174 VKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 584 V+G V+ SQE +GPTTV L+GL PG HGFH+H GDTTNGCMSTG HFNP HG PED+ RHA G A T+VDNQIPLSGP+S+IGRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 2 VEGVVTLSQEDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 138
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 4.126e-46 Identity = 92/151 (60.93%), Postives = 104/151 (68.87%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 +VKAV V+ G KGTV F QEG+G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH G + D +I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEGEGCPVKVTGEVTGLAKGQHGFHVHEFGDNTNGCMSSGPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.126e-46 Identity = 92/148 (62.16%), Postives = 105/148 (70.95%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAVAVL GT V G V+ QE DGPTTV+ ++GL PG HGFH+H GDTTNGC+STG HFNP HG P D RHA G A T+VD+QIPLSG NS++GRA VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 66 KAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 213
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.200e-45 Identity = 91/151 (60.26%), Postives = 104/151 (68.87%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 +VKAV V+ G KGTV F QE +G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH G + D++I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150 The following BLAST results are available for this feature:
BLAST of CN181890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181890 ID=CN181890; Name=CN181890; organism=Citrus sinensis; type=EST; length=651bpback to top |