CN181890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_DROTE (Superoxide dismutase [Cu-Zn] OS=Drosophila teissieri GN=Sod PE=3 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 1.917e-43 Identity = 87/151 (57.62%), Postives = 102/151 (67.55%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 +VKAV V+ G KGTV F QE + P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHG P DENRH ++ D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.917e-43 Identity = 85/137 (62.04%), Postives = 95/137 (69.34%), Query Frame = -2 Query: 174 KGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 581 KGTV F QE + P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP GKEHG P DENRH G + D +I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 6 KGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 142
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_DROER (Superoxide dismutase [Cu-Zn] OS=Drosophila erecta GN=Sod PE=3 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 7.283e-43 Identity = 87/151 (57.62%), Postives = 101/151 (66.89%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 +VKAV V+ G KGTV F QE + P VSG + GL HGFHVH GD TNGCMS+GPHFNP GKEHG P DENRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKCLHGFHVHEFGDNTNGCMSSGPHFNPHGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGCGVIGI 150
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 4.721e-42 Identity = 85/149 (57.05%), Postives = 104/149 (69.80%), Query Frame = -2 Query: 174 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 620 +KAV VL G+ VKGT++F Q+ G TV+G +SGL PG HGFH+H GD TNGC S+G HFNP + HG PED+ RH G AT + D I L+G +SIIGRAVVVHA DDLGKGGHE SKTTG+AGGR++CG+IG+ Sbjct: 3 IKAVCVLVGS--VKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKGGHEDSKTTGHAGGRLSCGVIGI 149
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42 Identity = 85/151 (56.29%), Postives = 97/151 (64.24%), Query Frame = -2 Query: 174 MVKAVAVLGGTEGVKGTVSFSQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 623 +VKAV V+ G VKGTV F Q+ P V+G ++GL G HGFHVH GD TNGC S GPHFNP G HG P D NRH G + D I L G NSI+GR +VVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--VKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGCGVIGI 150
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 6.817e-41 Identity = 80/148 (54.05%), Postives = 96/148 (64.86%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAV VL G V+G + F Q+ +GP V G ++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH G A ++ D+ I LSG NSIIGR +VVH PDDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKGGNEESTKTGNAGSRLACGVIGI 151
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 8.903e-41 Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = -2 Query: 174 VKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 620 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG PEDE RH G A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+ACG+IG+ Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLACGVIGI 152
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 8.903e-41 Identity = 83/149 (55.70%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 177 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIG 623 MVKAV VL G+ VKG V F Q+ DG TV G + GL G HGFH+H GD TNGC+S GPHFNP K HG P+D +RH G A F D QI L G SIIGR VVH DDLGKGG + S TGNAGGR+ACG+IG Sbjct: 1 MVKAVCVLAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHV-GDLGNVTAEGGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGGDDESLKTGNAGGRLACGVIG 148
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 1.163e-40 Identity = 82/149 (55.03%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 177 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIG 623 MVKAV VL G+ VKG V F Q+ +G +V G + GL G HGFH+H GD TNGCMS G HFNP K HG P D +RH G A F + D+ I L GPNSIIGR VVH DDLGKGG++ S TGNAGGR+ACG+IG Sbjct: 1 MVKAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHV-GDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGRLACGVIG 148
BLAST of CN181890 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.519e-40 Identity = 86/150 (57.33%), Postives = 97/150 (64.67%), Query Frame = -2 Query: 174 KAVAVLGGTEGVKGTVSFSQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXGTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 617 KAV VL G V GTV F Q+ + P VSG + GL G HGFHVH GD TNGC S G HFNP ++HG P RH T ++ D+QI L GPNSIIGR +VVHADPDDLG GGHELSKTTGNAGGR+ACG+IGL Sbjct: 4 KAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151 The following BLAST results are available for this feature:
BLAST of CN181890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181890 ID=CN181890; Name=CN181890; organism=Citrus sinensis; type=EST; length=651bpback to top |