CX675879

Overview
NameCX675879
Unique NameCX675879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: S2541_MOUSE (Solute carrier family 25 member 41 OS=Mus musculus GN=Slc25a41 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13
Identity = 53/178 (29.78%), Postives = 83/178 (46.63%), Query Frame = -2
Query:  192 PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVK-QYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDY---KNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG 713
            P E++K RL     L  +GQ      Y G +D A+++L  +G  R L++G +P M   +P       VYEL++  +   G+D                  C   + YP  +V++ +Q  D     NP   G    FK+IL  +G  GLY+G TP + + +PA    +L YE  + +LG
Sbjct:  143 PMEVLKTRL----TLRFTGQ------YKGLLDCARQILERDG-TRALYRGYLPNMLGIIPYACTDLAVYELLQCLWQKLGRDMKDPSGLVSLSSVTLSTTCGQMASYPLTLVRTRMQAQDTVEGSNPTMQG---VFKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKKTLG 306          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: UCP1_CANFA (Mitochondrial brown fat uncoupling protein 1 OS=Canis familiaris GN=UCP1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13
Identity = 50/176 (28.41%), Postives = 90/176 (51.14%), Query Frame = -2
Query:  195 PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDY---KNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 713
            P +  K RLQ Q    G GQ   A +Y G +     + R+EG L+ L+ GL   + R+V   +   G+Y+ V+++++ GQ  +               A  +    PT+VVK  +Q   +   + P+++G+ +A++ I  +EG+ GL+KG TP + R+V  N    + Y++ + +L
Sbjct:   33 PLDTAKVRLQIQGE--GQGQPPRAPRYRGVLGTVATLARTEG-LQKLYSGLPAGLQRQVGFASLRIGLYDSVREWLSPGQGAAASLGSRISAGVMTGGAAVFIG-QPTEVVKVRLQAQSHLHGRKPRYTGTYNAYRIIATTEGLTGLWKGTTPNLMRNVIINCTELVTYDLMKEAL 204          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: ORT1_YEAST (Mitochondrial ornithine carrier protein OS=Saccharomyces cerevisiae GN=ORT1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13
Identity = 54/177 (30.51%), Postives = 80/177 (45.20%), Query Frame = -2
Query:  213 SFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTS-----QXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYE 728
            S +  P EL+KC+LQ  +    S +     K+   +   K ++ +E GL GL++G   T  RE  G  A F  YE+VK+ +            +                F  S++P D VKSV+Q +           +A KKI    G+KG Y+G    + R+VPANAA F  +E
Sbjct:  122 SLVLTPVELVKCKLQVANLQVASAKT----KHTKVLPTIKAII-TERGLAGLWQGQSGTFIRESFGGVAWFATYEIVKKSLKDRHSLDDPKRDESKIWELLISGGSAGLAFNASIFPADTVKSVMQTEHIS------LTNAVKKIFGKFGLKGFYRGLGITLFRAVPANAAVFYIFE 287          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCP62_BOVIN (Putative mitochondrial carrier protein FLJ44862 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13
Identity = 52/185 (28.11%), Postives = 84/185 (45.41%), Query Frame = -2
Query:  195 LACPTELIKCRLQAQSALAGSGQVGVAVK---------YGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 722
            L  P +LI+ RLQ Q+       +G+  +         Y GPV     ++R+EG L GL++G    + R+VPG    F  Y  +  ++   +  +               A  W +  P DVVKS +Q D     K+ G +D   +  + EG+K  ++G T    R  P +AA FL YE++  ++
Sbjct:  120 LGAPVDLIEIRLQMQTQPFQEANLGLKPRVAALGEQPAYQGPVHCFATIVRTEG-LAGLYRGASAMLLRDVPGYCLYFIPYVFLSDWITP-EACAGPSPCAVWLAGGMAGAISWGTATPMDVVKSRLQADGVYVNKYRGVLDCMSQSYQKEGLKVFFRGITVNAVRGFPMSAAMFLGYELSLQAI 302          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13
Identity = 58/183 (31.69%), Postives = 88/183 (48.09%), Query Frame = -2
Query:  195 VSFLAC--PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDY--KNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 731
            V+ L C  P +LI+ RL  Q  + G+       KY G  D  K ++R EG + GL+KGL  +     P  A  F  YE +K+     +DT+                    + YP D+++  +QV     K+  ++G+ DAF+KI++ EGV GLY G  P   + +PA +  F  YEV +  L
Sbjct:  253 VTSLLCTYPLDLIRSRLTVQ--VFGN-------KYNGIADTCKMIIREEG-VAGLYKGLFASALGVAPYVAINFTTYENLKKTFIP-KDTTPTVVQSLTFGAISGATAQTLT-YPIDLIRRRLQVQGIGGKDILYNGTFDAFRKIIRDEGVLGLYNGMIPCYLKVIPAISISFCVYEVMKKIL 423          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: MCFC_DICDI (Mitochondrial substrate carrier family protein C OS=Dictyostelium discoideum GN=mcfC PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13
Identity = 47/169 (27.81%), Postives = 74/169 (43.79%), Query Frame = -2
Query:  213 PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKS--VIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYE 713
            P E+++ RL A+          +A  Y G  D  K++  SE  +R  ++GL  ++   +P +     VYE +K  +                       C     YP  VVKS  + Q       K++G  D   KI+K EG  GLYKG  P+  +S+P+++  F+ YE
Sbjct:  298 PLEVVRLRLSAE----------IAGTYNGIFDCFKKIAISEKSIRPFYRGLGASITATIPHSGVNMMVYEFLKHKVIKMTGNEFPTAGQLLVCASTSSVCGQLVGYPFHVVKSRLITQGSSVNQEKYTGLFDGLTKIIKKEGPIGLYKGIVPSFMKSIPSHSITFIVYE 456          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 57/184 (30.98%), Postives = 86/184 (46.74%), Query Frame = -2
Query:  195 LACPTELIKCRLQAQSALAGSGQVGVAVK---YGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQ-YMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYK----NPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 722
            L  P +  K RLQ Q    G  Q  +A +   Y G +     ++R+EG  R L+ GLV  + R++   +   G+Y+ VKQ Y   G D S               A       PTDVVK   Q   +     N K+SG++DA++ I + EGV+GL+KG  P + R+   N    + Y++ +  L
Sbjct:   30 LTFPLDTAKVRLQIQ----GENQAALAARSAQYRGVLGTILTMVRTEGP-RSLYSGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSSIITRILAGCTTGAMAVT--CAQPTDVVKIRFQASMHTGLGGNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCGEMVTYDIIKEKL 206          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: UCP1_HUMAN (Mitochondrial brown fat uncoupling protein 1 OS=Homo sapiens GN=UCP1 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 44/175 (25.14%), Postives = 88/175 (50.29%), Query Frame = -2
Query:  198 PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKN---PKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSS 713
            P +  K RLQ Q    G       ++Y G +     V+++EG ++ L+ GL   + R++   +   G+Y+ V++++  G++T+                  +    PT+VVK  +Q   + +   P+++G+ +A++ I  +EG+ GL+KG TP + RSV  N    + Y++ + +
Sbjct:   33 PLDTAKVRLQVQ----GECPTSSVIRYKGVLGTITAVVKTEGRMK-LYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAGLTTGGVAVFIG-QPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPNLMRSVIINCTELVTYDLMKEA 201          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 58/179 (32.40%), Postives = 81/179 (45.25%), Query Frame = -2
Query:  195 LACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNP---KFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 722
            +A PT+++K R QAQ A AG G+     +Y   VD  K + R EG LRGL+KG  P +AR    N A    Y+L+K  +    D                  C      P DVVK+      Y N    ++S +      +L+ EG +  YKGFTP+  R    N   F+ YE  + +L
Sbjct:  133 VAQPTDVVKVRFQAQ-ARAGGGR-----RYRSTVDAYKTIAREEG-LRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKA-DLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKT-----RYMNSAPGQYSSAGHCALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYEQLKRAL 298          

HSP 2 Score: 72.4034 bits (176), Expect = 2.811e-12
Identity = 49/175 (28.00%), Postives = 83/175 (47.43%), Query Frame = -2
Query:  195 PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNP--KFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 713
            P +  K RLQ Q    G  Q   + +Y G +     ++R+EG  R L+ GLV  + R++   +   G+Y+ VK +   G + +               A       PTDVVK   Q         ++  ++DA+K I + EG++GL+KG +P +AR+   N A  + Y++ + +L
Sbjct:   33 PLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGP-RSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTKGSEHAGIGSRLLAGSTTGALAVA--VAQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAELVTYDLIKDTL 204          
BLAST of CX675879 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 49/175 (28.00%), Postives = 83/175 (47.43%), Query Frame = -2
Query:  195 PTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXACFWFSVYPTDVVKSVIQVDDYKNP--KFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 713
            P +  K RLQ Q    G  Q   + +Y G +     ++R+EG  R L+ GLV  + R++   +   G+Y+ VKQ+   G + +               A       PTDVVK   Q         ++  +++A+K I + EG +GL+KG +P +AR+   N A  + Y++ + +L
Sbjct:   33 PLDTAKVRLQIQGERQGPMQAAASAQYRGVLGTILTMVRTEGP-RSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVA--VAQPTDVVKVRFQAQARAGAGRRYQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDTL 204          
The following BLAST results are available for this feature:
BLAST of CX675879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
S2541_MOUSE4.336e-1329.78Solute carrier family 25 member 41 OS=Mus musculus... [more]
UCP1_CANFA5.663e-1328.41Mitochondrial brown fat uncoupling protein 1 OS=Ca... [more]
ORT1_YEAST5.663e-1330.51Mitochondrial ornithine carrier protein OS=Sacchar... [more]
MCP62_BOVIN5.663e-1328.11Putative mitochondrial carrier protein FLJ44862 ho... [more]
MCFB_DICDI5.663e-1331.69Mitochondrial substrate carrier family protein B O... [more]
MCFC_DICDI7.397e-1327.81Mitochondrial substrate carrier family protein C O... [more]
UCP3_BOVIN1.262e-1230.98Mitochondrial uncoupling protein 3 OS=Bos taurus G... [more]
UCP1_HUMAN1.648e-1225.14Mitochondrial brown fat uncoupling protein 1 OS=Ho... [more]
UCP2_PIG2.152e-1232.40Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]
UCP2_BOVIN2.152e-1228.00Mitochondrial uncoupling protein 2 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_65D12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-65D12-H23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675879 ID=CX675879; Name=CX675879; organism=Citrus sinensis; type=EST; length=732bp
TTTTCTCGTACCCAAATTAAACTTAAAAAGCTATCTTGAAGAATCAAAAG
ACCGTTACCATATTGCTAAACAATTTTTTACAGAGGCATCATTTGGTGAC
TGGAAGATGTCTTCGAAATAAGCAATATGATAAGTGCGGCTAATGATCAC
CCAAATCATTGGACACCAATCATGGAGCAATGAAACAATCATCCCAAACT
AGATCTTGTCACTTCATACGCCAAGAAGCATGCAGCATTTGCAGGAACAC
TTCTGGCCATGGCAGGGGTGAAACCCTTGTACAAGCCTTTGACACCTTCT
GATTTCAGGATCTTTTTGAAGGCATCAATGGAACCAGAGAATTTGGGATT
TTTGTAATCATCGACCTGAATAACACTCTTGACAACATCAGTGGGGTAAA
CAGAGAACCAGAAACAAGCTCCAGATAAACCACCTGCCAAAAGCACTGCT
CCTCTTCCCAACTGAGAGGTGTCTTGGCCTCCTGCCATATACTGTTTCAC
CAATTCATACACACCAAACATGGCAGCATTCCCTGGAACCTCACGTGCCA
TTGTGGGAACCAGGCCCTTGAAGAGACCCCTAAGACCGCCTTCTGATCTA
AGAACACGCTTAGCCACATCCACTGGTCCACCATACTTCACTGCCACACC
AACTTGGCCAGAACCTGCTAATGCACTTTGGGCTTGCAACCTGCATTTGA
TCAATTCTGTGGGGCAAGCAAGAAAAGAAACA
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