CN188749

Overview
NameCN188749
Unique NameCN188749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 263.077 bits (671), Expect = 1.097e-69
Identity = 130/148 (87.84%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +DQLT++QI+EFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYEEFV++MMAK
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM2_BRAFL (Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=2 SV=4)

HSP 1 Score: 262.692 bits (670), Expect = 1.432e-69
Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +DQLT++QI+EFKEAFSLFDKDG+  ITTKELGTVMRSLGQNPTE ELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAF+VFDKD NGFISAAELRHVMTN GEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGNGNITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDKDGNGFISAAELRHVMTNPGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 262.307 bits (669), Expect = 1.871e-69
Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +DQL+++QISEFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTE ELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINY+EFVK+M++K
Sbjct:    2 ADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.443e-69
Identity = 130/148 (87.84%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +D LT++QI+EFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:    2 ADNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.443e-69
Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +DQLT++QI+EFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 261.922 bits (668), Expect = 2.443e-69
Identity = 128/148 (86.49%), Postives = 141/148 (95.27%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +DQLT++QI+EFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELR+VMTNLGEKLTDE VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 3.191e-69
Identity = 127/148 (85.81%), Postives = 142/148 (95.95%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +DQL+++QISEFKEAFSLFDKDG   ITTKELGTVMRSLGQNP++AEL+DMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVK+M++K
Sbjct:    2 ADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEFVKMMLSK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 261.151 bits (666), Expect = 4.167e-69
Identity = 128/148 (86.49%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +DQLT++QI+EFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTEAELQDMINEVD DGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD DGDGQ+NYEEFV +M +K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTSK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 260.381 bits (664), Expect = 7.108e-69
Identity = 127/148 (85.81%), Postives = 140/148 (94.59%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            +D L+++QI+EFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    2 TDALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 149
[Close]
BLAST of CN188749 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.212e-68
Identity = 129/148 (87.16%), Postives = 139/148 (93.92%), Query Frame = 1 
Query:   43 SDQLTDDQISEFKEAFSLFDKDGHRCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 486
            ++ LT +QI+EFKEAFSLFDKDG   ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LM+RKM DTD+EEE+KEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    2 AEALTHEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
The following BLAST results are available for this feature:
BLAST of CN188749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 465
Match NameE-valueIdentityDescription
CALM_TETPY1.097e-6987.84Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM2_BRAFL1.432e-6986.49Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=... [more]
CALM_PAXIN1.871e-6986.49Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALM_STYLE2.443e-6987.84Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PATSP2.443e-6986.49Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_OREMO2.443e-6986.49Calmodulin OS=Oreochromis mossambicus GN=calm PE=2... [more]
CALM_AGABI3.191e-6985.81Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALM_SUBDO4.167e-6986.49Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_HALOK7.108e-6985.81Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALM_EUGGR1.212e-6887.16Calmodulin OS=Euglena gracilis PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006K23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188749 ID=CN188749; Name=CN188749; organism=Citrus sinensis; type=EST; length=720bp
CGTTAAAGGTCTGTTTCTGTCTAAGTTTTCTCAACGATCACGTCTGATCA
ACTCACCGATGATCAGATCTCTGAATTTAAGGAAGCCTTCAGCCTCTTTG
ACAAGGATGGACACCGGTGTATTACTACTAAGGAGCTTGGAACTGTTATG
AGGTCACTCGGGCAGAACCCTACCGAAGCAGAACTCCAGGATATGATTAA
TGAAGTCGATGCTGACGGGAATGGTACCATTGACTTCCCGGAGTTCCTTA
ACTTGATGGCGCGCAAGATGAAGGACACTGATTCAGAGGAGGAGTTAAAG
GAGGCTTTTCGGGTTTTTGATAAGGATCAGAATGGGTTCATTTCTGCTGC
TGAACTCCGCCATGTGATGACAAATCTTGGTGAGAAGTTGACTGATGAGG
AAGTTGATGAGATGATTCGTGAAGCTGATGTGGATGGTGATGGCCAGATC
AATTATGAAGAGTTTGTTAAAGTCATGATGGCCAAGTGAGAACCTCTCAA
CTATCACTTAAAAAAAAAAAAATAAATAAATATCAAAATCTAAAGACTAA
AAAATCAAAGTGAAGAGTGCAGTTGTGACATCCTACATCGATCTCAAGAG
GTCTTGGCTTGTTTAAATATCCTGTGAGCTCCTTGACTTGTGGTTGTGTT
TAGGGTTGCAAGTCCATCAAAATCGTGATGACTTGTGTTCCTAATATAGA
TAGTATCTACATTGGGCTGG
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