CN181793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44 Identity = 93/165 (56.36%), Postives = 121/165 (73.33%), Query Frame = -2 Query: 254 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 748 RMVR+LF MAR IIF DE+D+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD ALLRPGR+DRK+EF P+ E R I IH++ M+ R I + +A ++GA++++VCTEAGMFA+R RR V+++DF A+ KV+K Sbjct: 250 RMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIK 413
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.914e-44 Identity = 87/163 (53.37%), Postives = 125/163 (76.69%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 R+VRELF +A++ AP+IIF+DEID++G++R E+ + +GD EVQRT+++LL +DGFE +K++ ATNRIDILD+ALLRPGR DR IE P P+EE RL ILK+H+R + + ++L +IA G +GA+L+A+C EAGM+A+R R +T+EDF A+ KV Sbjct: 258 RLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANT-SGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKV 419
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.971e-44 Identity = 87/177 (49.15%), Postives = 133/177 (75.14%), Query Frame = -2 Query: 218 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 748 ++VR++F +A+E +P IIF+DEID++ S R ES +G GD EVQRT+++LL ++DGF++ +K++ ATNR DILD A+LRPGR DR IE P+E+ RL+ILKIH+ +MNL + +DL+++A+ GA+LKAVCTEAGMFA+RE R + +DF+ A++K+ K+ + + + +L Sbjct: 228 KLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCSYDMPQL 402
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44 Identity = 96/165 (58.18%), Postives = 120/165 (72.73%), Query Frame = -2 Query: 254 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 748 RMVRELF MAR IIF DEID+IG AR + G+G GD+EVQRTMLEL+ QLDGF+ IKVL ATNR + LD+AL+RPGRIDRK+EF P+ E R IL+IH++ M + + I + IA +GAEL++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 259 RMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVK 422
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44 Identity = 94/163 (57.67%), Postives = 118/163 (72.39%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 ++VRELF +A HAPSIIF+DEID+IG R + SG G EVQRTMLELLNQLDGF+ N IKV+MATN+I+ LD AL+RPGRIDRKIEF P+ ++ I IH+ RM L ++++ + SGA++KA+CTEAGM ALRERR VT +DF A KV Sbjct: 249 KLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSG-GRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKV 410
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44 Identity = 90/163 (55.21%), Postives = 119/163 (73.01%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V QEDF AV KV Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44 Identity = 90/163 (55.21%), Postives = 119/163 (73.01%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V QEDF AV KV Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44 Identity = 90/163 (55.21%), Postives = 119/163 (73.01%), Query Frame = -2 Query: 260 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 748 R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V QEDF AV KV Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 177.178 bits (448), Expect = 8.479e-44 Identity = 89/169 (52.66%), Postives = 127/169 (75.15%), Query Frame = -2 Query: 242 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 748 ++VR+ F +A+E AP+IIF+DE+D+IG+ R +S +GD EVQRTMLELLNQLDGF + +++KVL ATNR+D+LD ALLR GR+DRKIEFP P+E+SR IL+IHSR+M I+ +++A + +GA+LKAV EAGM ALR + V EDF +++V ++++ Sbjct: 261 KLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK-SGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSK 428
BLAST of CN181793 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.889e-43 Identity = 88/177 (49.72%), Postives = 131/177 (74.01%), Query Frame = -2 Query: 218 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 748 ++VR++F +A+E +P IIF+DEID++ S R ES +G GD EVQRT+++LL ++DGF++ +K++ ATNR DILD A+LRPGR DR IE P+E+ RL+I KIH+ +MN+ + +DL++IA+ GA++KAVCTEAGMFA+RE R +VT +DF+ A+ KV K+ + + L Sbjct: 228 KLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKVTGKKEKSEEGIAHL 402 The following BLAST results are available for this feature:
BLAST of CN181793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 367
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181793 ID=CN181793; Name=CN181793; organism=Citrus sinensis; type=EST; length=749bpback to top |