CN181779

Overview
NameCN181779
Unique NameCN181779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19
Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = -3
Query:  300 NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 641
            +S+++ +  +    +   +  E+   GP+ V+F VY+DF HY+ GVY H TG         +  HAV L+G+GT +  G DYWI+ N W  SWG +GYF+I+RG++EC IE   +A  P  K
Sbjct:  342 SSEYHYVGGFYGGCNEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHH-TGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIALAATPIPK 462          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19
Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = -3
Query:  300 KKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 662
            K+N L + +S++Y +  +    +   +  E+ K+GP+ V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G DYWI+ N W   WG  GYF+I+RG++EC IE   +A +P  K
Sbjct:  333 KENCLRYYSSEYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPK 461          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19
Identity = 47/122 (38.52%), Postives = 71/122 (58.20%), Query Frame = -3
Query:  300 NSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 641
            +S +Y +  +    +   +  E+ K+GP+ V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G +YWI+ N W  +WG  GYF+I+RG++EC IE   VA +P  K
Sbjct:  341 SSDYYYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIAVAAIPIPK 461          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: TINAL_MOUSE (Tubulointerstitial nephritis antigen-like OS=Mus musculus GN=Tinagl1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.242e-18
Identity = 57/156 (36.54%), Postives = 77/156 (49.36%), Query Frame = -3
Query:  321 AVPTPGCE---------PAYLTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 725
            A PTP C              T +C    V  N +++ +      AYR+ SD ++IM E+ +NGPV+    V+EDF  Y+ G+Y H              G H+VK+ GWG  T  DG    YW  AN W   WG  G+F+I RG+NEC IE  V+
Sbjct:  302 ASPTPRCMMHSRAMGRGKRQATSRCPNGQVDSNDIYQVTP-----AYRLGSDEKEIMKELMENGPVQALMEVHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGTNECDIETFVL 452          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.242e-18
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = -3
Query:  321 NQLWRNSKHYSIS-AYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 656
            N    N+  Y ++  YR+ S+ ++IM E+ +NGPV+    V+EDF  YK G+Y H    +         G H+VK+ GWG  T  DG    YW  AN W  +WG  G+F+I RG NEC IE  V+
Sbjct:  329 NSYVNNNDIYQVTPVYRLGSNDKEIMKELMENGPVQALMEVHEDFFLYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGHFRIVRGVNECDIESFVL 453          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.051e-18
Identity = 56/156 (35.90%), Postives = 75/156 (48.08%), Query Frame = -3
Query:  321 AVPTPGCE---------PAYLTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGE--DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 725
            A PTP C              T +C    V  N +++ +       YR+ SD ++IM E+ +NGPV+    V+EDF  Y+ G+Y H              G H+VK+ GWG  T  DG    YW  AN W   WG  G+F+I RG NEC IE  V+
Sbjct:  303 ASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTP-----VYRLASDEKEIMKELMENGPVQALMEVHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGINECDIETFVL 453          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.794e-17
Identity = 51/130 (39.23%), Postives = 66/130 (50.77%), Query Frame = -3
Query:  333 TPKCVRKCVKKNQLWRNSKHYS-ISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV---------MGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIE 689
            T KC    V KN     +  YS I  Y   ++ + +  E+  NGP  V F VYEDF  YK G+Y H T            +  HAV L+G+G     GE YW + N W   WG  GYF+I RG++ECG+E
Sbjct:  318 TGKCT---VSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGVE 444          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.053e-14
Identity = 34/101 (33.66%), Postives = 51/101 (50.50%), Query Frame = -3
Query:  363 VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 665
            ++   LWR   + S+S        E +MAEIY NGP+       E  ++Y  G+Y       +  H + + GWG S+DG +YWI+ N W   WG  G+ +I
Sbjct:  184 IQNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATERMSNYTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI 278          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 34/101 (33.66%), Postives = 51/101 (50.50%), Query Frame = -3
Query:  363 VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 665
            ++   LWR   + S+S        E +MAEIY NGP+       E  ++Y  G+Y       +  H + + GWG S+DG +YWI+ N W   WG  G+ +I
Sbjct:  184 IQNYTLWRVGDYGSLSGR------EKMMAEIYANGPISCGIMATEMMSNYTGGIYAEHQDQAVINHIISVAGWGVSNDGIEYWIVRNSWGEPWGEKGWMRI 278          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -3
Query:  336 AYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 617
            AY + S+ + +   +++ GPV V+  V  D  +YKSGV KH + D    H V L+G+G  +D + YW L N W   WG  G+F+IKR  N CGI
Sbjct:  242 AYDLRSEKK-LRQVLHEKGPVSVAIDVV-DLTNYKSGVAKHCSVDHGLNHGVLLVGYGQENDVK-YWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
The following BLAST results are available for this feature:
BLAST of CN181779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CATC_BOVIN1.916e-1939.34Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATC_RAT2.503e-1938.46Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
CATC_MOUSE4.269e-1938.52Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
TINAL_MOUSE1.242e-1836.54Tubulointerstitial nephritis antigen-like OS=Mus m... [more]
TINAL_HUMAN1.242e-1840.00Tubulointerstitial nephritis antigen-like OS=Homo ... [more]
TINAL_RAT8.051e-1835.90Tubulointerstitial nephritis antigen-like OS=Rattu... [more]
CATC_SCHMA1.794e-1739.23Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CATZ_RAT7.053e-1433.66Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
CATZ_MOUSE1.571e-1333.66Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]
CATV_GVXN2.680e-1341.49Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H12_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181779 ID=CN181779; Name=CN181779; organism=Citrus sinensis; type=EST; length=754bp
CCCTTTTTTAGCAGACGGAGCATGATGTGACATTTTTCATCTAAACGAAT
AATTCGGCGAGGAGAAACGAAGTTATTACAACTGGTTCTATTTTTACACA
CAACATTAAACTCCATTAATACATTCAATTATGCAAGACGGGAGCTTCCC
ATTTCATGCCTTGATAGCTTAGGTTCAACGATACACCCCTATAGCTACAC
ATTTGATATATAAATAACAACATGAAGGTATAGCAAAGTCTGCTCTCAAG
CTGAAGCATCCTCAAACATATCTGCACTTGTAATCTCTTTGACAAGATTT
TTGGATGAAGGCAAACCAGCAACCACATCCTCTTCAATACCACACTCATT
TGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCC
ACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAA
CCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTT
GTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATAAACTGTGAAGGAAA
CTTCAACTGGTCCATTCTTGTAAATTTCTGCCATTATGTCCTCTGGATCA
GAATTGATTCTATATGCACTAATACTGTAGTGCTTTGAATTCCTCCAAAG
CTGGTTTTTCTTGACGCACTTCCTCACACACTTTGGAGTAAGATATGCCG
GCTCACAACCAGGGGTGGGAACAGCCCAGTACTATCAAAGTAGGGATCAC
ACTC
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