CN181770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.007e-52 Identity = 103/185 (55.68%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIK 653 +Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D GI+ Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQ 188
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.007e-52 Identity = 103/185 (55.68%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIK 653 +Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D GI+ Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQ 188
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.717e-52 Identity = 103/185 (55.68%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIK 653 +Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D GI+ Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQ 188
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.525e-52 Identity = 101/185 (54.59%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIK 653 +Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIG+EFG+++I + K +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ ++L GNK DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D GI+ Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQ 188
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.042e-49 Identity = 95/179 (53.07%), Postives = 128/179 (71.51%), Query Frame = 3 Query: 102 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 638 Y YLFK ++IGD+GVGKS LL++FT F TIGVEF R I +DNK IK QIWDTAGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+HA++N+ IML+GNK DL H RAVSTEE + FA E+ L F+E SA A NVEEAF I++ + + + ++ Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDD 185
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.504e-48 Identity = 93/183 (50.82%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 108 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKV 656 YL K+IIIG VGKSCLL +F D +F+ TIGV+F +R++ I K +KLQIWDTAGQE FRS+ SYYRG+AG LVYD+T RE++NH+ +WL D + A+ ++TI+L+GNK DL +R V+ E + A+E+GL+FME SA T + VEE F+K TI KI G +V+ E G+++ Sbjct: 6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTIMTKIDSG--EVNLEHLGVQI 186
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.751e-48 Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGI 650 SY YL K ++IGD+GVGKSCLLL+F++ F P TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G LL+YD+T +++F+++ +W + QHA+ N+ +LIGNKCD +R VS E+G+ A E G+ F+EASAKT NV+EAF A I K+ D + SN++ + Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNV 188
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.751e-48 Identity = 93/172 (54.07%), Postives = 118/172 (68.60%), Query Frame = 3 Query: 87 QTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYK 602 +T+ Y YLFK ++IGD+GVGKS LL +FT F TIGVEF + + +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TRR TF + A WL++ R H + N+ +MLIGNK DL H AV TE+G+ FA+ L FME SA A NVE AF + IY+ Sbjct: 5 RTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYR 176
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.663e-47 Identity = 91/188 (48.40%), Postives = 128/188 (68.09%), Query Frame = 3 Query: 93 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKV 656 N Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R I +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N+ +L+GNKCDL ++ V ++FA G+ F+E SAK A NVE+AF+ AA I K++ G +E + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNI 189
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.172e-47 Identity = 89/169 (52.66%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 93 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIY 599 N Y+FK ++IGD+ VGKS +L +F F TIGVEF R + ID+K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R+TF+H+ WLE+ R HA+ N+ I+LIGNKCDL ++R V TE+ ++FA++ GL F+E SA A NVE AF IY Sbjct: 11 NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIY 179 The following BLAST results are available for this feature:
BLAST of CN181770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181770 ID=CN181770; Name=CN181770; organism=Citrus sinensis; type=EST; length=753bpback to top |