CN181770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45 Identity = 90/190 (47.37%), Postives = 131/190 (68.95%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA----ATIYKKIQDGVFDVSNESYGIKV 656 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME SAK NVE AF A A + KK++ SN+ G+K+ Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQ--GVKI 191
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45 Identity = 90/190 (47.37%), Postives = 131/190 (68.95%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA----ATIYKKIQDGVFDVSNESYGIKV 656 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME SAK NVE AF A A + KK++ SN+ G+K+ Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQ--GVKI 191
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45 Identity = 90/190 (47.37%), Postives = 131/190 (68.95%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA----ATIYKKIQDGVFDVSNESYGIKV 656 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME SAK NVE AF A A + KK++ SN+ G+K+ Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQ--GVKI 191
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45 Identity = 88/175 (50.29%), Postives = 122/175 (69.71%), Query Frame = 3 Query: 93 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDG 617 N Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R I +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T RE++ ++ WL++ ++A+ N+ +L+GNK DL ++ V ++FA G+ F+E SAK A NVE+AF+ AA I K++ G Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 176
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 86/167 (51.50%), Postives = 120/167 (71.86%), Query Frame = 3 Query: 102 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYK 602 + YLFK ++IGD+ VGKSC LL+F D + + TIGV+F R + ++ K +KLQIWDTAGQE FR+IT SYYRGA G ++VYDIT E+FN++ WL++ ++AN ++ +L+GNKCDLA RAV T + +A+E G+ F+E SAK + NVEEAF+ +A I K Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKK 171
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 90/190 (47.37%), Postives = 131/190 (68.95%), Query Frame = 3 Query: 99 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTA----ATIYKKIQDGVFDVSNESYGIKV 656 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME SAK NVE AF A A + KK++ SN+ G+K+ Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQGSNQ--GVKI 191
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45 Identity = 87/172 (50.58%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 93 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKI 608 N Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +L+GNK DL ++ V + + FA E G+ F+E SAK A NVE+AF+ AA I ++ Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRM 173
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45 Identity = 87/165 (52.73%), Postives = 115/165 (69.70%), Query Frame = 3 Query: 108 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYK 602 Y+FK ++IGD+ VGKS LL +F F TIGVEF R + ID + +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R++F+H+A WLE+ R HA+ N+ IMLIGNK DL R V TE+ ++FA+ L FME SA + NVE AF+ IY+ Sbjct: 17 YVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYR 181
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45 Identity = 89/172 (51.74%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 102 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDL-AHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQD 614 Y YL K ++IGD+GVGKSCLLL+F+D F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N+ +L+GNK D+ +RAV T +G+ A E+G+ F E SAKT NVEE F A I +++ D Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 183
BLAST of CN181770 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.009e-44 Identity = 87/172 (50.58%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 93 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKI 608 N Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +L+GNK DL ++ V + FA E G+ F+E SAK A NVE+AF+ AA I ++ Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRM 173 The following BLAST results are available for this feature:
BLAST of CN181770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181770 ID=CN181770; Name=CN181770; organism=Citrus sinensis; type=EST; length=753bpback to top |