CN181764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 2 Query: 38 GFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIDGHS--YFNLVLITNVGGAGDVRAVSLKGSR--TRWQPMSRNWGQNWQ 595 G S +S +GYG W + AT+Y Y + Q + + AA +LF NG CG+C+QI C + + C + V T+ C PGG C HFD+S F +A AG++ + Y+RV C+ + F +D S Y+ +L+ G GD+ AV + +R W+ M ++WG W+ Sbjct: 32 GRRSTMSLGRGYG-WSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC-PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWR 226
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 60/183 (32.79%), Postives = 85/183 (46.45%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTI-DGHSYFNLVLITNV-GGAGDVRAVSLKGSRTR-WQPMSRNWGQNW 592 W+ A AT+Y YG L + A++ LF NG CGAC+++ C D C R ++ V T+ CP C + HFDLS VF +A G++PVIYRR CK G I F + +G + F L L+ G GD+ ++ ++ + R W M WG NW Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL-DKSICSRRAVTVIITDECP---GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW 214
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.862e-16 Identity = 61/184 (33.15%), Postives = 84/184 (45.65%), Query Frame = 2 Query: 77 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTID--GHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595 GW A AT+Y Y Q + + AA S +L+ G CGAC+++ C + C V T+ CP GG C HFD+S +A+ AGI+ V YRRV CK +G I F +D + ++ VLI G GD+ AV L + W PM +NWG W+ Sbjct: 63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP-GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWR 244
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.375e-16 Identity = 61/183 (33.33%), Postives = 81/183 (44.26%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTI-DGHSYFNLVLITNV-GGAGDVRAVSLK-GSRTRWQPMSRNWGQNW 592 W A AT+Y YG L T A+S LF G CGAC+++ C D C R ++ V T+ C PGG C HFDLS F +A G + V+YRR CK G I F + +G + F L L+ G GD+ ++ LK + +WQ M WG W Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCL-DASICSRRAVTVIVTDEC-PGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATW 225
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15 Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA-------QYRAGIVPVIYRRVRCKRNG-GIRFTIDGHS--YFNLVLITNVGGAGDVRAVSLKGSRTR-WQPMSRNWGQNW 592 W+ A AT+Y YG+L + + A+S LF G CGAC+++ C D C + ++ + AT+ P G + HFDLS F H+A G++ ++YRR CK G I F ++ S Y+ +LI G GD+ ++ ++ + ++ W M WG NW Sbjct: 40 WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL-DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 221
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 59/186 (31.72%), Postives = 86/186 (46.24%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNG-GIRFTID---GHSYFNLVLITNVGGAGDVRAVSL--KGSRTRWQPMSRNWGQNWQ 595 W N AT+Y Y Q + + AA S +++ +GL CG+C+Q+ C+ + C + V T+ C PGG C HFDLS F +A Q R AG++ + Y RV C G + F +D SYF VL+ G GD+ + L G+ W PM ++WG W+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWK 219
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.570e-14 Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNGGIRFT----IDGHSYFNLVLITNVGGAGDVRAVSL--KGSRTRWQPMSRNWGQNWQ 595 W N AT+Y Y G ++ + + AA S +++ +GL CG+C+Q+ C + C + V T+ C PGG C HFDLS F +A Q R AG++ + Y RV C GG++ T + + + VL+ G GD+ V L G+ W M ++WG W+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDEC-PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWK 219
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14 Identity = 60/204 (29.41%), Postives = 89/204 (43.63%), Query Frame = 2 Query: 56 SSVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWC-LRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTID--GHSYFNLVLITNVGGAGDVRAVSLKGSRTR-----------WQPMSRNWGQNWQ 595 SS G GGW+NA AT+Y G N+ + T+ + LF +G CG+C+QI C P L ++I+T N+ P +HFDLS F +A+ AGI+ + +RRV C+ G + F ++ + + +L+ G GDV V L SR W PM +WG W+ Sbjct: 84 SSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWR 281
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.569e-14 Identity = 58/183 (31.69%), Postives = 81/183 (44.26%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQ-GYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRA-------GIVPVIYRRVRCKRNG-GIRFTI-DGHSYFNLVLITNV-GGAGDVRAVSLK-GSRTRWQPMSRNWGQNW 592 W A AT+Y YG+L ++S LF +G CGAC+++ C D C R ++ V T+ C PGG C HFDLS F +A A G + V+YRR CK G I F + +G + F L L+ G GD+ ++ +K + W M WG W Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCL-DHGICSRRAVTVIVTDEC-PGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATW 228
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13 Identity = 55/185 (29.73%), Postives = 86/185 (46.49%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNG-GIRFTIDGHSYFN--LVLITNVGGAGDVRAVSLKGS--RTRWQPMSRNWGQNWQ 595 W A +T+Y YGN +Q + +A +LF +G CGAC+Q+ C + C + + V T+ CP C + HFDLS F +A Q R G + ++Y++V C G + F +D S N VL+ V G G++ + LK + +W MS++WG W+ Sbjct: 47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSKNPVTVVITDECP---GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWK 227 The following BLAST results are available for this feature:
BLAST of CN181764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181764 ID=CN181764; Name=CN181764; organism=Citrus sinensis; type=EST; length=597bpback to top |