CN181764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 61/204 (29.90%), Postives = 90/204 (44.12%), Query Frame = 2 Query: 53 VSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIDGHS---YFNLVLITNVGGAGDVRAVSLKGSRTR-------WQPMSRNWGQNWQ 595 VS YG GW+ A AT+Y G N+ + + T+ + +F +G CG+C+QI C DP C ++I+T N+ P +HFDLS F +A+ +GI+ + +RRV C G I F ++ S YF VL+ GDV V L S++ W PM +WG W+ Sbjct: 34 VSDASAYGSGWLPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPS-CSGNIETVIITDMNYYPVA------RYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYF-AVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIWR 229
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 58/196 (29.59%), Postives = 88/196 (44.90%), Query Frame = 2 Query: 71 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYG--TNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIDGHS---YFNLVLITNVGGAGDVRAVSLKGSRT-------RWQPMSRNWGQNWQ 595 +G W A AT+Y G ++ Y + T+ + LF +G CG+C++I C D R ++I+T N+ P + HFDLS F +A+ +GI+ + + RV C+ G I F ++ +S YF VL+ G GDV V L S+T RW PM +WG W+ Sbjct: 52 WGPWTKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQSCSGRSETVIITDMNYYPVAPF------HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYF-AVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWR 240
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.507e-12 Identity = 50/145 (34.48%), Postives = 76/145 (52.41%), Query Frame = 2 Query: 206 LFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDP-PNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTI-----DGHSYFNLVLITNVGGAGDVRAVSL--KGSRTRWQPMSRNWGQNWQ 595 +F +G CG+CF++ C+ P+ C +I+ T+ +P +HFDLS F +A+ +AGI+ + +RRVRCK G + T +YF VL+ VGG GDV V L KGS W+P++ +WG W+ Sbjct: 85 IFKDGKGCGSCFEVKCSK-PEACSDKPVIIHITDMN-----TEPIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYF-AVLVKYVGGDGDVVKVELKEKGSE-EWKPLNESWGAIWR 221
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.507e-12 Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIV--TATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTID---GHSYFNLVLITNVGGAGDVRAVSL--KGSRTRWQPMSRNWGQNWQ 595 W++A AT+Y Y ++ + + A + +F +GL CG+CF+I C + P C ++V T N+ P +HFDL+ F +A+ +AGI+ + +RRV+CK + + F ++ G +Y L L+ V G GD+ AV + KGS T ++P+ +WG W+ Sbjct: 50 WLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC-DKPVECSGKPVVVHITDMNYEPIAA------YHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDVKEKGSDT-YEPLKHSWGAIWR 228
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.276e-12 Identity = 54/191 (28.27%), Postives = 93/191 (48.69%), Query Frame = 2 Query: 71 YGG-WINAHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIV--TATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIDG--HSYFNLVLITNVGGAGDVRAVSL--KGSRTRWQPMSRNWGQNWQ 595 YG W++A AT+Y Y ++ + + A + +F +GL CG+CF+I C + P C ++V T N+ P +HFDL+ F +A+ +AGI+ + +RRV+CK + F ++ + + +L+ V G GD+ AV + KGS T ++P+ +WG W+ Sbjct: 45 YGSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAECSGKPVVVYITDMNYEPIAA------YHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDIKEKGSDT-YEPLKHSWGAIWR 227
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 62/214 (28.97%), Postives = 91/214 (42.52%), Query Frame = 2 Query: 11 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLR-GSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIDGHS--YFNLVLITNVGGAG-----DVRAVSLKGSRTR-WQPMSRNWGQNWQ 595 M L V+ GF + V W+ A AT+Y G N + + T+ + LF +G CGAC+QI C N+P + ++I+T N+ P +HFDLS F +A+ AGI+ + +RRV C G + F ++ S + VL+ G DV G TR W PM R+WG W+ Sbjct: 11 MLLSVLATYGF---AAGVVYTNDWLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVA------RYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWR 215
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 53/190 (27.89%), Postives = 84/190 (44.21%), Query Frame = 2 Query: 74 GGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGG--IRFTIDG--HSYFNLVLITNVGGAGDVRAVSLKGS-RTRWQPMSRNWGQNWQ 595 G W+ A AT+Y G N+ Y TA + +F +G CG+C+++ C P+ C ++ +T N+ P +HFDLS F +A+ GI+ V +RRVRCK G I F I+ + + VL+ V GD+ + ++ W+PM +WG W+ Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CSGNPVTVFITDMNYEPIA------PYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYVAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWR 223
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB1_MAIZE (Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 53/190 (27.89%), Postives = 84/190 (44.21%), Query Frame = 2 Query: 74 GGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGG--IRFTIDG--HSYFNLVLITNVGGAGDVRAVSLKGS-RTRWQPMSRNWGQNWQ 595 G W+ A AT+Y G N+ Y TA + +F +G CG+C+++ C P+ C ++ +T N+ P +HFDLS F +A+ GI+ V +RRVRCK G I F I+ + + VL+ V GD+ + ++ W+PM +WG W+ Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CSGNPVTVYITDMNYEPIA------PYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWR 223
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 55/188 (29.26%), Postives = 84/188 (44.68%), Query Frame = 2 Query: 80 WINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTIDGHS---YFNLVLITNVGGAGDVRAVSLKGSRTR-WQPMSRNWGQNWQ 595 W A AT+Y G N + + T+ + +F +G CG+C+QI C N P C ++I+T N+ P +HFDLS F +A+ AGI+ + ++RV C G + F ++ S YF VL+ G GDV V L + ++ W PM +WG W+ Sbjct: 42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPA-CSGNPETVIITDMNYYPVS------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYF-AVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWR 221
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 55/196 (28.06%), Postives = 87/196 (44.39%), Query Frame = 2 Query: 77 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPG--------GWCDPPNHHFDLSQPVFQHIA------QYR-AGIVPVIYRRVRCKRNG-GIRFTIDGHSYFN--LVLITNVGGAGDVRAVSL----KGSRTRWQPMSRNWGQNWQ 595 GW N AT+Y Y Q + + AA S ++++G CG+C++++CA + + C + V T+ P G G C HFD+S F +A Q R AG++ + Y RV C+ G G+ F +D S N +L+ D+ AV + G+ W PM ++WG W+ Sbjct: 38 GWSNGIATWYGDPNGAGSEGGACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCAGN-EACSGIPVTVVITDQGPGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEWTGVGLTFVVDSGSNPNYLALLVEYDDNDSDLAAVDIMPIGAGASGSWIPMQQSWGAVWR 232 The following BLAST results are available for this feature:
BLAST of CN181764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181764 ID=CN181764; Name=CN181764; organism=Citrus sinensis; type=EST; length=597bpback to top |