CN181762

Overview
NameCN181762
Unique NameCN181762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 60.8474 bits (146), Expect = 5.547e-21
Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = -2
Query:  292 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 495
            IQ  + ++T+GG D + EC GN++ M SA E  H GWG +V++GV        T+P  ++  R  KG+
Sbjct:  255 IQNYLIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGS 322          

HSP 2 Score: 59.3066 bits (142), Expect = 5.547e-21
Identity = 25/54 (46.30%), Postives = 40/54 (74.07%), Query Frame = -3
Query:  126 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 287
            FG ++  +D+P +V+ Y+ K L +++FITH +P S+IN+AF+ M KGE +R II
Sbjct:  324 FGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSII 377          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.547e-21
Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +L+ RT KG +    ++ D
Sbjct:  249 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKD 327          

HSP 2 Score: 48.9062 bits (115), Expect = 5.547e-21
Identity = 20/55 (36.36%), Postives = 35/55 (63.64%), Query Frame = -3
Query:  123 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 287
            FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  GE +R I++
Sbjct:  320 FGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILT 374          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.214e-21
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = -2
Query:  295 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG 495
            I + + EMT+GG D + +CTGN+  M +A E  H GWG +V++GV +      T+P  ++  RT KG
Sbjct:  256 IVDKLIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGTSVIIGVAAAGKEISTRPFQLVTGRTWKG 322          

HSP 2 Score: 58.151 bits (139), Expect = 7.214e-21
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = -3
Query:  120 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 287
            FG  K R+ LP +V+ Y++ +L++E+FITHR P + INKAFE M  G+ +R ++ +
Sbjct:  325 FGGVKGRSQLPGIVNNYLDGKLKVEEFITHREPLAAINKAFEEMHAGDCIRAVVDL 380          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.588e-20
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = -2
Query:  295 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG 501
            +PI +V+ EMT+GG+D + EC GN+  M +A E  H GWGV+V++GV        T+P  ++  RT KG
Sbjct:  250 KPISQVLGEMTDGGLDYTFECVGNVGIMRAALESCHKGWGVSVILGVAGGGQEISTRPFQLVTGRTWKG 318          

HSP 2 Score: 50.0618 bits (118), Expect = 1.588e-20
Identity = 19/56 (33.93%), Postives = 37/56 (66.07%), Query Frame = -3
Query:  120 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 287
            FG +K    +P +VD YM  ++ +++F++H +PF  IN+AF+ M  G+ +R ++ +
Sbjct:  321 FGGWKSVESVPKLVDDYMAGKIMVDEFVSHSLPFDSINEAFDLMHAGKSIRTVLQL 376          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 1.588e-20
Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP         P+ +L+ RT KG +    ++ D
Sbjct:  248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKD 326          

HSP 2 Score: 47.3654 bits (111), Expect = 1.588e-20
Identity = 19/55 (34.55%), Postives = 35/55 (63.64%), Query Frame = -3
Query:  123 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 287
            FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +R I++
Sbjct:  319 FGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTILT 373          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.064e-20
Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = -2
Query:  289 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTL 501
            +P+ ++I E+T GGVD S ECTGN+D +  AF   H GWG  VLVG+          P+ + + R + G++
Sbjct:  262 KPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGIYPTPRTLPLHPMELFDGRRITGSV 332          

HSP 2 Score: 55.4546 bits (132), Expect = 2.064e-20
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = -3
Query:  120 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 287
            FG +KP++ LP+     M   ++LE FIT+ +PF +IN AF+ +  G+ LRCI+ +
Sbjct:  333 FGGFKPKSQLPNFAQQCMKGVVKLEPFITNELPFEKINDAFQLLRDGKSLRCILQI 388          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.067e-20
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = -2
Query:  292 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 501
            +P+Q+V+ EMT  GVD + EC GN++ M SA E  H GWG +V++GV        T+P  ++  R  KGT
Sbjct:  243 KPVQQVLVEMTKWGVDHTFECIGNVNVMRSALESAHRGWGQSVIIGVAGAGKEISTRPFQLVTGRVWKGT 312          

HSP 2 Score: 49.2914 bits (116), Expect = 2.067e-20
Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = -3
Query:  126 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 287
            FG  K RT LP +V+  M+ ++EL  F+TH +   +IN+AF+ M  G+ +R +I
Sbjct:  314 FGGVKGRTQLPGMVEDAMSGKIELAPFVTHTMELDKINEAFDLMHDGKSIRTVI 367          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.910e-20
Identity = 26/70 (37.14%), Postives = 37/70 (52.86%), Query Frame = -2
Query:  292 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 501
            +  Q  + E  +GG D + EC GN+  M  A E  H GWGV+ ++GV        T+P  ++  RT KGT
Sbjct:  255 KSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGT 324          

HSP 2 Score: 57.7658 bits (138), Expect = 5.910e-20
Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = -3
Query:  117 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 287
            FG +K    +P +VD YMNK+L +++FITHR    +IN AF+ + KGE LR +++ E
Sbjct:  326 FGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVLAFE 382          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 5.912e-20
Identity = 26/68 (38.24%), Postives = 42/68 (61.76%), Query Frame = -2
Query:  295 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG 498
            PIQ+V+   T+GG+D + +CTGN+  M SA E  H GWG ++++GV +      T+P  ++  R  +G
Sbjct:  254 PIQDVLIHETDGGLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAAAGQEISTRPFQLVTGRVWRG 321          

HSP 2 Score: 54.6842 bits (130), Expect = 5.912e-20
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = -3
Query:  120 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 287
            FG  K R+ LP +V  Y++ +LE++K+ITHR P  EIN+AF  M  G  ++ ++S+
Sbjct:  324 FGGVKGRSQLPDLVKEYLDHKLEIDKYITHRRPLKEINEAFTDMHNGNCIKTVLSI 379          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.692e-19
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = -2
Query:  292 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 465
            GG D S +CTGN+  M  A EC H GWG ++++GV    A   T+P  ++  R  KGT
Sbjct:  261 GGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVTGRVWKGT 318          

HSP 2 Score: 55.8398 bits (133), Expect = 1.692e-19
Identity = 22/54 (40.74%), Postives = 36/54 (66.67%), Query Frame = -3
Query:  126 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 287
            FG  + RTD+P +VD YM+ ++E++  ITH +   +INK F+ M  GE +R ++
Sbjct:  320 FGGARGRTDVPQIVDWYMDGKIEIDPMITHTLSLDDINKGFDLMHAGESIRSVV 373          
The following BLAST results are available for this feature:
BLAST of CN181762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
ADHX_DROME5.547e-2138.24Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH1E_HORSE5.547e-2141.77Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
FADH_CANMA7.214e-2140.30S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADHX_MYXGL1.588e-2043.48Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADH1S_HORSE1.588e-2041.77Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADHL3_ARATH2.064e-2039.44Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
FRMA_PASPI2.067e-2042.86S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADHX_CAEEL5.910e-2037.14Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
FADH2_SCHPO5.912e-2038.24Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
FADH_PARDE1.692e-1943.10S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181762 ID=CN181762; Name=CN181762; organism=Citrus sinensis; type=EST; length=502bp
AAGACATATACTTAGGGACTGATGCATCAAGTTACAAAGATGAAGTCAAT
AGCAGGTGCTTGCCCACCTACTGTTGTTATTTACTTGATTATTCTTTCCC
TTTTTCGCTCCTAGTCTTCCATGCTGATAATGCACCTCAAACCCTCCCCT
TTCACCATGTACTCGAAGGCTTTATTGATTTCCGAGAAAGGGATGCGATG
GGTTATAAACTTCTCCAGTTCCAGTTGCTTGTTCATGTACATATCAACGA
CAGAGGGCAGATCAGTCCGCGGTTTGTAGTTCCCGAATTAATGTTCCTTT
GAGGGTTCTTTCGTTAAGTACATTGATCGGCTTGGTCATGAACACTGCAT
CCTTACTGGGGACTCCAACGAGCACAGCTACACCCCATCCATCATGAACA
CACTCGAAGGCTGAGATCATGTTATCAATGTTGCCGGTGCACTCCACACT
TCTGTCAACTCCACCGTTCGTCATCTCTGCAATTACCTCTTGAATTGGTC
TG
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