CN181762

Overview
NameCN181762
Unique NameCN181762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 7.095e-17
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +PIQEVI E+++GGVD S E  G +D +++A    H   G +V+VGVP         P+ +L+ RT KG +    ++ D
Sbjct:  249 KPIQEVIQEISDGGVDFSFEVIGRLDTVVAALLSCHGACGTSVIVGVPPDSQSLTVNPMLLLSGRTWKGAIFGGFKSKD 327          

HSP 2 Score: 45.0542 bits (105), Expect = 7.095e-17
Identity = 18/55 (32.73%), Postives = 35/55 (63.64%), Query Frame = -3
Query:  123 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 287
            FG +K +  +P +V  +M K+  L+  IT+ +PF +IN+ F+ +  G+ +R I++
Sbjct:  320 FGGFKSKDSVPKLVADFMAKKFSLDPLITNVLPFEKINEGFDLLRSGKSIRTILT 374          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 59.6918 bits (143), Expect = 1.199e-16
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = -2
Query:  289 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTL 501
            +PI EV+ EMT+GGVD S E  G +D  +SA  C  +  GV+V+VGVP         P  +L+ R+ KG +
Sbjct:  249 KPIYEVLQEMTDGGVDFSFEVIGRLDTKVSALMCCQESHGVSVIVGVPPNAQSLTIDPKVLLSGRSWKGAV 319          

HSP 2 Score: 45.8246 bits (107), Expect = 1.199e-16
Identity = 19/55 (34.55%), Postives = 35/55 (63.64%), Query Frame = -3
Query:  123 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 287
            FG YK + D+P +V  +M K+  LE  IT+  P ++IN+ F+ +  G+ +R +++
Sbjct:  320 FGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPLAKINEGFDLLRAGKSIRTVLT 374          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.199e-16
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +PI EV+ EMT  GVD S E  G I+ M  A    H  +GV+V+VGVP         P+ + + RT KG++    ++ D
Sbjct:  249 KPIHEVLTEMTGKGVDYSFEVIGRIETMTEALASCHYNYGVSVIVGVPPAAQKISFDPMLIFSGRTWKGSVFGGWKSKD 327          

HSP 2 Score: 48.1358 bits (113), Expect = 1.199e-16
Identity = 19/54 (35.19%), Postives = 35/54 (64.81%), Query Frame = -3
Query:  126 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 287
            FG +K +  +P +V  YM K+  L+  ITH +PF++IN+ F+ +  G+ +R ++
Sbjct:  320 FGGWKSKDAVPKLVADYMKKKFVLDPLITHTLPFTKINEGFDLLRTGKSIRTVL 373          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 2.633e-16
Identity = 23/56 (41.07%), Postives = 39/56 (69.64%), Query Frame = -3
Query:  120 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 287
            FG  K R++LP+ VD YM    +++++IT+  P   INKAF++M +G+ +RC++ M
Sbjct:  320 FGGVKGRSELPNFVDEYMQGHFKVDEYITNEEPLKNINKAFDHMHEGKCIRCVVDM 375          

HSP 2 Score: 47.3654 bits (111), Expect = 2.633e-16
Identity = 20/70 (28.57%), Postives = 38/70 (54.29%), Query Frame = -2
Query:  292 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 501
            + + + + ++T+GGVD + +CTGN+  M    +  H GWG   ++GV +       +P  V+  R + G+
Sbjct:  249 KDLVQYVIDVTDGGVDYAFDCTGNVTVMQQELQFCHKGWGKLCVIGVAAAGKTLDFRPFLVVTGRQVLGS 318          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 55.0694 bits (131), Expect = 2.633e-16
Identity = 26/79 (32.91%), Postives = 45/79 (56.96%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG    +    T  ++++  R++KGT     ++ D
Sbjct:  253 KPVQDVITELTGGGVDFSLDCAGTAQTLKAAVDCTVVGWGSCTVVGAKVDEMNIST--VDMILGRSVKGTFFGGWKSVD 329          

HSP 2 Score: 49.2914 bits (116), Expect = 2.633e-16
Identity = 20/55 (36.36%), Postives = 36/55 (65.45%), Query Frame = -3
Query:  123 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 287
            FG +K    +P++V  Y NK+ +L+  +TH +PF +IN A + M +G+ +R I++
Sbjct:  322 FGGWKSVDSVPNLVTDYKNKKFDLDLLVTHALPFDKINDAIDLMNQGKSIRTILT 376          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 54.6842 bits (130), Expect = 2.633e-16
Identity = 26/79 (32.91%), Postives = 44/79 (55.70%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG    +    T  ++V+  R++ GT     ++ D
Sbjct:  253 KPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPT--VDVILGRSINGTFFGGWKSVD 329          

HSP 2 Score: 49.6766 bits (117), Expect = 2.633e-16
Identity = 20/55 (36.36%), Postives = 35/55 (63.64%), Query Frame = -3
Query:  123 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 287
            FG +K    +P++V  Y NK+ +L+  +TH +PF  IN A + M +G+ +R I++
Sbjct:  322 FGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILT 376          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 3.423e-16
Identity = 30/80 (37.50%), Postives = 44/80 (55.00%), Query Frame = -2
Query:  265 RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +PI EV+ ++T G GVD S E  G  + MISAF   H   G +V+VGVP   ++    P+ +   RT KG +    ++ D
Sbjct:  248 KPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPLMLFTGRTWKGCVFGGWKSKD 327          

HSP 2 Score: 48.1358 bits (113), Expect = 3.423e-16
Identity = 18/54 (33.33%), Postives = 34/54 (62.96%), Query Frame = -3
Query:  126 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 287
            FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+ +  G+ +R ++
Sbjct:  320 FGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 4.449e-16
Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +PI EV+ EMT  GVD S E  G+ + M +A    H  +GV+V++GVP         P+ + + RT KG++    ++ D
Sbjct:  249 KPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKD 327          

HSP 2 Score: 50.447 bits (119), Expect = 4.449e-16
Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = -3
Query:  126 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 287
            FG +K +  +P +V  YM K+  LE  ITH +PF +IN+ F+ + KG+ +R ++
Sbjct:  320 FGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1_ANAPL (Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrhynchos GN=ADH1 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 7.678e-16
Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = -2
Query:  265 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 498
            PI +V+  MT  GVD S E  G I+ M++A    H  +GV+V+VGVP         P+ + + RT KG++    ++ D
Sbjct:   60 PIHKVLIGMTGYGVDYSFEVIGRIETMVAALASCHYNYGVSVIVGVPPAAQNITFDPMLLFSGRTWKGSVFGGWKSKD 137          

HSP 2 Score: 50.447 bits (119), Expect = 7.678e-16
Identity = 20/55 (36.36%), Postives = 36/55 (65.45%), Query Frame = -3
Query:  123 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 287
            FG +K +  +P +V  YM K+  L+  ITH +PFS+IN+ F+ +  G+ +R +++
Sbjct:  130 FGGWKSKDSVPKLVADYMKKKFVLDPLITHTLPFSKINEGFDLLRAGKSIRSVLT 184          
BLAST of CN181762 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 9.769e-16
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = -2
Query:  265 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTLIRELQTAD 501
            +PI EV+ EMT  GVD S E  G+ + M +A    H  +GV+V+VGVP         P+ + + RT KG++    ++ D
Sbjct:  248 KPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPMLLFSGRTWKGSVFGGWKSKD 326          

HSP 2 Score: 48.1358 bits (113), Expect = 9.769e-16
Identity = 19/54 (35.19%), Postives = 34/54 (62.96%), Query Frame = -3
Query:  126 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 287
            FG +K +  +P +V  YM K+  L+  ITH +PF +IN+ F+ +  G+ +R ++
Sbjct:  319 FGGWKSKDSVPKLVADYMEKKFVLDPLITHTLPFHKINEGFDLLRTGKSIRSVL 372          
The following BLAST results are available for this feature:
BLAST of CN181762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
ADH1_RABIT7.095e-1737.97Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1_GEOAT1.199e-1642.25Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1_COTJA1.199e-1637.97Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
FADH1_SCHPO2.633e-1641.07Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH4_RAT2.633e-1632.91Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADH4_MOUSE2.633e-1632.91Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1_NAJNA3.423e-1637.50Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_APTAU4.449e-1635.44Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_ANAPL7.678e-1635.90Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrh... [more]
ADH1_STRCA9.769e-1636.71Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181762 ID=CN181762; Name=CN181762; organism=Citrus sinensis; type=EST; length=502bp
AAGACATATACTTAGGGACTGATGCATCAAGTTACAAAGATGAAGTCAAT
AGCAGGTGCTTGCCCACCTACTGTTGTTATTTACTTGATTATTCTTTCCC
TTTTTCGCTCCTAGTCTTCCATGCTGATAATGCACCTCAAACCCTCCCCT
TTCACCATGTACTCGAAGGCTTTATTGATTTCCGAGAAAGGGATGCGATG
GGTTATAAACTTCTCCAGTTCCAGTTGCTTGTTCATGTACATATCAACGA
CAGAGGGCAGATCAGTCCGCGGTTTGTAGTTCCCGAATTAATGTTCCTTT
GAGGGTTCTTTCGTTAAGTACATTGATCGGCTTGGTCATGAACACTGCAT
CCTTACTGGGGACTCCAACGAGCACAGCTACACCCCATCCATCATGAACA
CACTCGAAGGCTGAGATCATGTTATCAATGTTGCCGGTGCACTCCACACT
TCTGTCAACTCCACCGTTCGTCATCTCTGCAATTACCTCTTGAATTGGTC
TG
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