CN181746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16 Identity = 63/199 (31.66%), Postives = 94/199 (47.24%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGK-KDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDF 649 M HRK PR GS G PRKRA K +P + +P +L F+GYKAGMTH+ +KP S + KE VTI+E+PP+ +G L L WA EE ++ K + D K K+ ++K T +R+L TQ + L +K+ ++EIQ+ GGS+ ++++ Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYLKR-----------KITSLKVDSSKMKEKLDLIQKNLNNITYMRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNY 185
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_SULTO (50S ribosomal protein L3P OS=Sulfolobus tokodaii GN=rpl3p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16 Identity = 58/197 (29.44%), Postives = 94/197 (47.72%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDF 649 M HRK PR GS G PRKRAS +++P ++P +L F+GYK GM+HI +KP S + KE V++IETPP+ P+G + T + ++E++ + + E GK D ++ +RVL TQ + + L +KK ++E+QV GG + ++++ Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMIDDKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLIQQR-------KVTRLKIDKEKMKGKLD---EINNKLNDILYLRVLIATQPKLVPSLGKKKPEIVEVQVGGGDIKSQLNY 186
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_METTP (50S ribosomal protein L3P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl3p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16 Identity = 55/190 (28.95%), Postives = 94/190 (49.47%), Query Frame = 2 Query: 83 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 PR GSL F PRKRA +++++ D+ + + F GYKAGMTH++ ++P S E VT++E PP+ G+R +WA++L++++ R +DI+++++++ + IRVLAHT R + G+ +K +MEI V G SV +++ A Sbjct: 7 PRRGSLAFSPRKRAKSEVPRIRSWVADERAG---MAGFAGYKAGMTHVIMIDDRPRSLTEGMEISVPVTVVEVPPMSVAALRVYEPYNGGIRPAGELWAENLSQDLERAI--------------TIPKARRGASLEDIESRVDELCE----IRVLAHTNPRLLTGVPKKVPDIMEIPVTGRSVEEQLKAA 175
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_THEON (50S ribosomal protein L3P OS=Thermococcus onnurineus (strain NA1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 63/199 (31.66%), Postives = 91/199 (45.73%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKY-----CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 K PR GSL + PRKRA +++ +PKD R+ F GYKAGMTHI+ ++PG KE VT++E PPL + GL + VW LN+ V+RR D ++ QA+L +++ +R+L HTQ +K +KK +ME + G V K D+A Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRKWPKD---SEVRMLGFAGYKAGMTHILMIDDRPG-LTKGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVKRRI----------------KTLPKDYNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVMEYAIGGDDVKAKFDYA 179
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_METB6 (50S ribosomal protein L3P OS=Methanoregula boonei (strain 6A8) GN=rpl3p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 63/197 (31.98%), Postives = 90/197 (45.69%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFY--KNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAY 655 K PR GSL F PRKRA K K++P+ + L F GYK GMTH++ + S KE VTIIE P + K G +L +WA+ L+ ++ RR KN+ ++ KK L I LA+TQ M G+ +K LMEI+V GG +A++ ++A+ Sbjct: 3 KINRPRRGSLAFSPRKRAQSPIPKYKSWPEHSGAPA--LLGFAGYKVGMTHVLMVDDHKDSPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTEIWAEPLDSQLSRRVTSPKNY---------------DSTAAKKKYSDAL--AAGLVAEIYALAYTQPATMSGVPKKVPDLMEIKVAGGDIAKQYEYAF 180
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_PYRIL (50S ribosomal protein L3P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl3p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16 Identity = 66/206 (32.04%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 53 SRMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFA 652 SR K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P S L+ KE +AVT+++ PPL P RS+ VWA L +RR T K D+ Q++K++++ V +R L TQ + G+ +K L+EI + G SV +++ FA Sbjct: 2 SRAMGLKINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVEDRPTSPLYGKEVVKAVTVLDAPPLFIWGFRLYTLDPTNGYKRSIAEVWAPELPAYLRRVL--------------------TLPEKVDVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERIKFA 185
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_METST (50S ribosomal protein L3P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl3p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16 Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWA-QHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKY---CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 + PR GS+ F PRKR +R +V +P+ D + L AF GYK GMTH+ + GS E VTI+E PPL KT GL++L V A +L++E+ R+ + DI+A++E+++ IRVL HT+ K+ + +KK ++E + G SV K+++A Sbjct: 3 RHHQPRKGSVAFSPRKRVARETPRVSTWPELDEAG---LLAFAGYKVGMTHVTALDSRKGSPTENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKTLTDVIANDNLDDELSRKI--------------------SVPKFDDIEAKIEELRNKIDDIDEIRVLIHTK-PKLTSVPKKKPEVLEFGLGGKSVEDKLEYA 176
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_THENV (50S ribosomal protein L3P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl3p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15 Identity = 63/200 (31.50%), Postives = 94/200 (47.00%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFA 652 K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P S L+ KE VT+++ PPL P RS+ VWA L +RR T K D+ Q++K++++ V +R L TQ + G+ +K L+EI + G SV +++ FA Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVEDRPTSPLYGKEVVRPVTVLDAPPLFIWGFRLYTLDPTNGYRRSIAEVWAPELPAYIRRVL--------------------TLPEKADVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERIKFA 181
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_PYRAE (50S ribosomal protein L3P OS=Pyrobaculum aerophilum GN=rpl3p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-15 Identity = 63/200 (31.50%), Postives = 97/200 (48.50%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFA 652 K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P S L+ KE +AVT+++ PPL P R++ VWA L + + R T K D+ QL+K++++ V +R L TQ + G+ +K L+EI + G SV ++++FA Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHRVL--------------------TLPEKLDVDKQLKKVEEFRDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERINFA 181
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_PYRKO (50S ribosomal protein L3P OS=Pyrococcus kodakaraensis GN=rpl3p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 66/202 (32.67%), Postives = 93/202 (46.04%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFY---KNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKY-----CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 K PR GSL + PRKRA +++++PKD R+ F GYKAGMTHI+ + PG KE VTI+E PPL + GL + VW L++ V RR KN+ ++ QA+L +++ +R+L HTQ + GLK KK +ME + G V K D+A Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKD---SEVRMLGFAGYKAGMTHILMIDDSPG-LTKGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRIKTLPKNY-------------------NEEAFQAKLGQLEDLVNDGEIADVRLLVHTQ-PWLIGLK-KKPEVMEYAIGGDDVKAKFDYA 179 The following BLAST results are available for this feature:
BLAST of CN181746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181746 ID=CN181746; Name=CN181746; organism=Citrus sinensis; type=EST; length=655bpback to top |