CN181746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_PYRAR (50S ribosomal protein L3P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl3p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 62/200 (31.00%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFA 652 K PR GS+G PRKRA+ +V+ +P + KP L F YKAGM H V ++P S L+ KE +AVT+++ PPL P LRS VWA L + + R T K D+ Q++++++Y V +R L TQ + G+ +K L+EI + G ++ +++ FA Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL--------------------TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQ-PHLSGIGKKTPELLEIPIGGVPNIDERIKFA 181
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_METKA (50S ribosomal protein L3P OS=Methanopyrus kandleri GN=rpl3p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 62/202 (30.69%), Postives = 95/202 (47.03%), Query Frame = 2 Query: 56 RMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNE-EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV--IRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 R R PR GSL F PRKRASR +++++P ++ R+ F GYKAGMTH + + P S +E VTI++ PP+ TP G R + WA+ E E+ R F DG+ ++E++ V IRV+ TQ +K G+ +KK +ME ++ G V ++ ++A Sbjct: 3 RGGRRNPGRPRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF------------------TVPKDGEAGDLDKIEELVDEGIVEEIRVIVATQPKK-AGVPKKKPDVMEYRIGGKDVRERFEYA 182
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_METS3 (50S ribosomal protein L3P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl3p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 56/195 (28.72%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 71 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 + PR GS+ F PRKRA++ ++K++P++D K L GYK GMTH +V D +K S + + VT++E PP+ KT RGL+ + V A +L+EE+ R+ + K + A+++ + I+VL HT K+ + +KK + E + G + +K++ A Sbjct: 3 RHHQPRKGSVAFSPRKRAAKETPRIKSWPQNDEPK---LLGLAGYKVGMTHALVTDSDK-NSPTNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITEVLADNLDEELSRKI-----------------SLPKEYNKSEAIAKIQGVLDKTEDIKVLVHTN-PKVTSVPKKKPDIFECGIGGANPEEKLNTA 175
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_SULIA (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 62/210 (29.52%), Postives = 99/210 (47.14%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWA----QHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ Q L+ R R + ++ + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIRSFSSF--------------LKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYA 195
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_METS5 (50S ribosomal protein L3P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 57/200 (28.50%), Postives = 89/200 (44.50%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLC-TVWAQ--HLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDF 649 M HRK PR GS G PRKR+ +++P+ + P L F+GYK GMTHI E S + KE VT++ETPP+ RG S+ VW + + RR + + KDI++ LE + + R+L TQ + L +K ++E+Q+ GG+ ++++ Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRSEELLPSPRSYPEVNLPNPVTL-GFVGYKVGMTHIFMIDEDRSSSMFGKEIYVPVTVLETPPIYVLALRAYGLNNRGEHSVMGEVWGDLGDFGKFITRRI-----------RGLKIDKEKKEHQLKDIESNLESVSYF----RLLVSTQPHLIPALGKKTPDIVEVQIGGGNTKNQLEY 184
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_METPE (50S ribosomal protein L3P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 58/190 (30.53%), Postives = 85/190 (44.74%), Query Frame = 2 Query: 83 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 PR GSL + PRKRA K ++P D +P L +F GYK GMTH++ + S K+ VTIIE PP+ G R+L VW + L+ + RR + G K + + T + L +TQ + G+ +K LME+ + GG++ QKV+FA Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYHSWPARD-GEPI-LQSFAGYKVGMTHVIMVDDHKNSPTEGKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEVWTEQLSTLLGRRI-------------TLPKKYSEEAGFKALSEAV--AAGTVTELHALMYTQPDTLTGVPKKVPELMEVCIGGGTLEQKVEFA 179
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_SULIY (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14 Identity = 60/208 (28.85%), Postives = 97/208 (46.63%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYA 195
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_SULIN (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14 Identity = 60/208 (28.85%), Postives = 97/208 (46.63%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYA 195
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_SULIM (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14 Identity = 60/208 (28.85%), Postives = 97/208 (46.63%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------FSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYA 195
BLAST of CN181746 vs. ExPASy Swiss-Prot
Match: RL3_SULIL (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14 Identity = 60/208 (28.85%), Postives = 97/208 (46.63%), Query Frame = 2 Query: 59 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 652 M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+ + P S + KE VT++E PP+ +G ++ T W+ + ++ RR + + D+ KK + ++L+ +K I R+L TQ RK+ L +K L+EIQ+ GG ++D+A Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYA 195 The following BLAST results are available for this feature:
BLAST of CN181746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181746 ID=CN181746; Name=CN181746; organism=Citrus sinensis; type=EST; length=655bpback to top |