CN181745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.263e-30 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = -3 Query: 194 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 538 GYH RT +N KIY++GK E SA TE D T+K ITPMGGF YG +N D++++KG G KKRV+TLR+S+ TSR ALE+++LK+IDTSS+FGHG FQ EK ++ G LK Sbjct: 272 GYHHRTSVNHKIYRIGKGDAED-SAATEVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.263e-30 Identity = 64/115 (55.65%), Postives = 84/115 (73.04%), Query Frame = -3 Query: 194 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 538 GYH RT N K++++GK S E + A T+FD ++K ITPMGGF YG V DY+++KG G KKRV+TLR++L QTSR A E+++LK+IDTSSKFGHG FQ +EK + G LK Sbjct: 272 GYHHRTSCNHKVFRIGKGSDEGN-ASTDFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.263e-30 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = -3 Query: 194 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 538 GY RT++N KIY++G A ++ +A T+FD TEK ITPMGGF YGVV D++++ G GP KRV+TLR+SLL TSR ALE + LK+IDT+SKFGHGRFQ E ++ G LK Sbjct: 271 GYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3A_SCHPO (60S ribosomal protein L3-A OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.263e-30 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = -3 Query: 194 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 538 GY RT++N KIY++G A ++ +A T+FD TEK ITPMGGF YGVV D++++ G GP KRV+TLR+SLL TSR ALE + LK+IDT+SKFGHGRFQ E ++ G LK Sbjct: 271 GYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.799e-30 Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = -3 Query: 194 NGYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 541 NG+H RT +N K+Y++G A ES A TEFDRT+K I PMGGF YG V D++L+KG G KKR+VT+R+SL TSR A E + LK+IDT+SKFG GRFQ EK + G LK Sbjct: 270 NGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METJA (50S ribosomal protein L3P OS=Methanocaldococcus jannaschii GN=rpl3p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = -3 Query: 248 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 538 GYH RTE NK+I K+G E ITP GGF HYGV+ +Y+++KG GP KR++ LR+++ Q + + EI +I T+SK G Sbjct: 254 GYHQRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_UNCMA (50S ribosomal protein L3P OS=Uncultured methanogenic archaeon RC-I GN=rpl3p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.005e-11 Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = -3 Query: 248 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 538 GYH RTE NK+I K+G ++E ITP GGF HYG++ DY+++KG GP KR+V +R ++ + + + ++ ++ T SK G Sbjct: 257 GYHQRTEYNKRILKMGDKAEE--------------ITPAGGFLHYGLIRNDYIMLKGSIPGPVKRMVRIRPAV--RPKNMPKQAPEITYLSTQSKMG 337
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_META3 (50S ribosomal protein L3P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl3p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.005e-11 Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = -3 Query: 245 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 538 G+H RTE NK+I K+G+ E I P GGF +YGVV +Y+L+KG GP KR+V LR+++ + L E L ++ T SK G+ Sbjct: 252 GFHQRTEYNKRILKIGENGSE--------------IVPKGGFLNYGVVKNNYVLVKGSVQGPAKRMVVLREAIRNPEDKFGLPE--LTYVSTESKQGN 333
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_PYRKO (50S ribosomal protein L3P OS=Pyrococcus kodakaraensis GN=rpl3p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.715e-11 Identity = 32/95 (33.68%), Postives = 54/95 (56.84%), Query Frame = -3 Query: 254 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 538 G+H RTE NK++ +G+ + D E +ITP GGFPHYG+V D+L+I+G G KR++ +R ++ + +E ++ ++ SK Sbjct: 257 GFHHRTEFNKRLIAIGE------NGKLVLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_THEON (50S ribosomal protein L3P OS=Thermococcus onnurineus (strain NA1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.239e-11 Identity = 31/95 (32.63%), Postives = 56/95 (58.95%), Query Frame = -3 Query: 254 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 538 G+H RTE NK++ +G+ + + ++ E +ITP GGFPHYG++ D+L+I+G G KR++ +R ++ + +E ++ +I SK Sbjct: 257 GFHHRTEFNKRLIAIGE-----NGKLKLDEKNEIEITPKGGFPHYGIIRSDFLMIQGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYISRESK 346 The following BLAST results are available for this feature:
BLAST of CN181745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181745 ID=CN181745; Name=CN181745; organism=Citrus sinensis; type=EST; length=543bpback to top |