CN181741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBA8_CHICK (Tubulin alpha-8 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.449e-17 Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 425 ENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 763 + C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E +D ++DNEA+YDIC R L + P++ +LN LI +S +T Sbjct: 2 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEQSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 114
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBGN_GUITH (Tubulin gamma chain, nucleomorph OS=Guillardia theta GN=tubG PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 8.699e-15 Identity = 58/236 (24.58%), Postives = 105/236 (44.49%), Query Frame = 2 Query: 59 EILHIQGGQCGNQIGSKFWEVVCAEHGI---DPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV-EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMS 754 EIL +Q G+ G G++FW+ + E + GK D NV++ E++ ++PR ++ DL + + Y +++ + GN+W KG+Y EG + V +++RK E + ++ F V + I IR YP + S+FP + V +PYN+ LS+ D + N A+ ++ + + SF +N++I T+S Sbjct: 4 EILTLQVGKTGILTGNEFWKSLVREKNLLSDFSLGKNSPTND------NVFFEESNESFFIPRTIIFDLSERDFNYIMKSNYSKMYDKNRHFILNKNTGNSWLKGYY-EGISNCNLVDNILRKRIEKMNSVKYFNVFNSINGGTGAGLSSYLIEYIRNNYPKSFINCCSIFPDLYGNTQVTFQPYNSVLSIAWQGLYCDSNIFFQNHAIENLLTKNQINNELSFRKVNYIIGKTIS 232
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB3_ANEPH (Tubulin beta-3 chain (Fragment) OS=Anemia phyllitidis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 2 Query: 665 EALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 EALYDICFRTLKL TP+FGDLNHLISATMSGVTCC Sbjct: 1 EALYDICFRTLKLVTPTFGDLNHLISATMSGVTCC 35 The following BLAST results are available for this feature:
BLAST of CN181741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181741 ID=CN181741; Name=CN181741; organism=Citrus sinensis; type=EST; length=771bpback to top |