CN181741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB1_GADMO (Tubulin beta-1 chain OS=Gadus morhua PE=2 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 2.630e-112 Identity = 193/239 (80.75%), Postives = 210/239 (87.87%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+H+Q GQCGNQIG+KFWEV+ EHGIDPTG Y GD+DLQL+RINVYYNEAS G+YVPRAVL+DLEPGTMDSVRSG +GQVFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPS+GDLNHL+SATMSGVT C Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGAFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_TRYBR (Tubulin beta chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.435e-112 Identity = 186/239 (77.82%), Postives = 212/239 (88.70%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+ +Q GQCGNQIGSKFWEV+ EHG+DPTG YQGD+DLQLERINVY++EA+ GRYVPR+VL+DLEPGTMDSVR+GPYGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELIDSVLDV KEAE+CDCLQGFQ+CH ISK+RE+YPDR+M+TFS+ PSPKVSDTVVEPYN TLSVHQLVEN+DE M +DNEALYDICFRTLKL+TP+FGDLNHL+SA +SGVTCC Sbjct: 1 MREIVCVQAGQCGNQIGSKFWEVISDEHGVDPTGTYQGDSDLQLERINVYFDEATGGRYVPRSVLIDLEPGTMDSVRAGPYGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVCCKEAESCDCLQGFQICHSLGGGTGSGMGTLLISKLREQYPDRIMMTFSIIPSPKVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVVSGVTCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_PLAFK (Tubulin beta chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=2) HSP 1 Score: 404.445 bits (1038), Expect = 3.435e-112 Identity = 190/238 (79.83%), Postives = 212/238 (89.08%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 766 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDP+G Y GD+DLQLER++V+YNEA+ GRYVPRA+LMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL+TP++GDLNHL+SA MSGVTC Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYCGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTC 238
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_PLAFA (Tubulin beta chain OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.435e-112 Identity = 189/238 (79.41%), Postives = 212/238 (89.08%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 766 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDP+G Y GD+DLQLER++V+YNEA+ GRYVPRA+LMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDV+RKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL+TP++GDLNHL+SA MSGVTC Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYSGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVLRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTC 238
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_PLAF7 (Tubulin beta chain OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0084 PE=3 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.435e-112 Identity = 190/238 (79.83%), Postives = 212/238 (89.08%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 766 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDP+G Y GD+DLQLER++V+YNEA+ GRYVPRA+LMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL+TP++GDLNHL+SA MSGVTC Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYCGDSDLQLERVDVFYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTC 238
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_LEIME (Tubulin beta chain OS=Leishmania mexicana PE=3 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.435e-112 Identity = 188/239 (78.66%), Postives = 211/239 (88.28%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+ Q GQCGNQIGSKFWEV+ EHG+DPTG YQGD+DLQLERINVY++E++ GRYVPRAVLMDLEPGTMDSVR+GPYGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELIDSVLDV RKEAE+CDCLQGFQ+ H ISK+REEYPDR+M+TFSV PSP+VSDTVVEPYN TLSVHQLVEN+DE M +DNEALYDICFRTLKL+TP+FGDLNHL++A MSGVTCC Sbjct: 1 MREIVSCQAGQCGNQIGSKFWEVIADEHGVDPTGSYQGDSDLQLERINVYFDESAGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVCRKEAESCDCLQGFQLSHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSVIPSPRVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVAAVMSGVTCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_BABBO (Tubulin beta chain OS=Babesia bovis PE=3 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.435e-112 Identity = 192/238 (80.67%), Postives = 211/238 (88.66%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 766 MREI+HIQ GQCGNQIG+KFWEV+ EHGID +G Y GD+DLQLERI+V+YNEA+ GRYVPRAVLMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL+TP++GDLNHL+SA MSGVTC Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDQSGTYHGDSDLQLERIDVFYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTC 238
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB2_CHICK (Tubulin beta-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.486e-112 Identity = 190/239 (79.50%), Postives = 210/239 (87.87%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDPTG Y GD+DLQLERINVYYNEA+ +YVPRA+L+DLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+SATMSGVT C Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB2B_RAT (Tubulin beta-2B chain OS=Rattus norvegicus GN=Tubb2b PE=1 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.486e-112 Identity = 190/239 (79.50%), Postives = 210/239 (87.87%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDPTG Y GD+DLQLERINVYYNEA+ +YVPRA+L+DLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+SATMSGVT C Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB2B_MOUSE (Tubulin beta-2B chain OS=Mus musculus GN=Tubb2b PE=1 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.486e-112 Identity = 190/239 (79.50%), Postives = 210/239 (87.87%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+HIQ GQCGNQIG+KFWEV+ EHGIDPTG Y GD+DLQLERINVYYNEA+ +YVPRA+L+DLEPGTMDSVRSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+SATMSGVT C Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTC 239 The following BLAST results are available for this feature:
BLAST of CN181741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181741 ID=CN181741; Name=CN181741; organism=Citrus sinensis; type=EST; length=771bpback to top |