CN181669

Overview
NameCN181669
Unique NameCN181669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_ECOLI (Hypoxanthine phosphoribosyltransferase OS=Escherichia coli (strain K12) GN=hpt PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.609e-29
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = 1
Query:   16 QISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 507
            +I  R+ EL  QIT  +              G+F+F+ADL R + +   VDF+ A SYGSG  ++    +  D   D++ K V++VEDI+D+G TLS +   L  +   S+++CTLLDKP+RR++ V +      + GF  PD FVVGYG+D+A+ YR+LPY+G
Sbjct:   13 EIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVE-----FIGFSIPDEFVVGYGIDYAQRYRHLPYIG 171          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_ECOL6 (Hypoxanthine phosphoribosyltransferase OS=Escherichia coli O6 GN=hpt PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.609e-29
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = 1
Query:   16 QISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 507
            +I  R+ EL  QIT  +              G+F+F+ADL R + +   VDF+ A SYGSG  ++    +  D   D++ K V++VEDI+D+G TLS +   L  +   S+++CTLLDKP+RR++ V +      + GF  PD FVVGYG+D+A+ YR+LPY+G
Sbjct:   13 EIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVE-----FIGFSIPDEFVVGYGIDYAQRYRHLPYIG 171          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_MYCTU (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium tuberculosis GN=hpt PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 74/181 (40.88%), Postives = 99/181 (54.70%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXAT----GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 531
            L T +QI  R+ EL  QI +D+                  GA LF+ DL R I +P   +F+   SYGS T SSG   +  D   D+  + V++VED+VD+G TLS L  NL S+   S+ VCTLL KP      VE+      Y GF+ P+ FVVGYG+D+ E YR+L Y+G L P  Y+
Sbjct:   27 LLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIA-----YVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ 202          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_MYCBO (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium bovis GN=hpt PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.451e-29
Identity = 74/181 (40.88%), Postives = 99/181 (54.70%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXAT----GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 531
            L T +QI  R+ EL  QI +D+                  GA LF+ DL R I +P   +F+   SYGS T SSG   +  D   D+  + V++VED+VD+G TLS L  NL S+   S+ VCTLL KP      VE+      Y GF+ P+ FVVGYG+D+ E YR+L Y+G L P  Y+
Sbjct:   27 LLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIA-----YVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ 202          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_BUCAP (Hypoxanthine phosphoribosyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=hpt PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.295e-28
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 1
Query:    7 TQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 507
            ++ ++  RV EL  +IT  +              G+F+F+ADL R I +   +DF+   SYG G +S+G   +  D   D+ +K+V++VEDI+D+G TLS ++  L  +   S+S+CTLLDKP  R++ + +      + GF  PD F+VGYG+D+A+ YR LPY+G
Sbjct:   10 SEKELDIRVRELGEEITKKYKNSKNKIILIALLRGSFVFIADLCRRIKIEHEIDFMTTSSYGRGMISTGDVKIIKDLDEDIYNKNVLIVEDIIDSGKTLSKVLGILKLRNPKSLSICTLLDKPECREVNINI-----DFVGFSIPDEFMVGYGIDYAQSYRYLPYIG 171          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_MYCAV (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium avium GN=hpt PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.209e-28
Identity = 71/181 (39.23%), Postives = 101/181 (55.80%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXAT----GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 531
            L T +QI  R+ EL  +I  ++                  GA +F+ DL R I LP   +F+   SYGS T SSG   +  D   D++ + V++VED+VD+G TLS L+ NL ++   S+ VCTLL KP  R   V++      Y GF+ P+ FVVGYG+D+ E YR+L Y+G L P  Y+
Sbjct:   27 LLTAEQIQARIAELGREIGDNYRDAAAETGQDLLLITVLKGAVIFVTDLARAIPLPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIQGRDVLIVEDVVDSGLTLSWLLRNLSTRHPRSLRVCTLLRKPDARGAHVDIA-----YVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ 202          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_VIBHA (Hypoxanthine phosphoribosyltransferase OS=Vibrio harveyi GN=hpt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.768e-28
Identity = 68/172 (39.53%), Postives = 103/172 (59.88%), Query Frame = 1
Query:    7 TQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPE 522
            ++ ++  R+ EL  QIT  +              G+F+F+ADL R I L   VDF+ A SYG+   SS    +  D   D+K K V++VEDI+DTG TL+ +   L  +   S+++CTLLDKP+RR+++V +      Y GF  PD FVVG G+D+A+ YR+LP++G + P+
Sbjct:   10 SEQEVQERIRELGKQITERYQGSEDLVMVGLLR-GSFVFMADLARAIELTHQVDFMTASSYGNTMESSRDVRILKDLDDDIKGKDVLIVEDIIDTGNTLNKIREILSLREPKSIAICTLLDKPSRREVEVPV-----DYVGFAIPDEFVVGVGIDYAQKYRDLPFIGKVVPQ 175          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STRT2 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=hpt PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.870e-27
Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L++Q+ I  +  EL  Q+T D+              GA  F+A+L+++I   I +DF+   SYG GT+SSG   +  D   +++ + VI +EDI+DTG TL  L      + ASSV + TL DKP  R + +E       Y  ++ P+ F+VG+G+D+ E YRNLPYVGVLK E Y
Sbjct:   10 LFSQEDIVTKTKELGQQLTKDY--AGKNPLLVCVLKGAVPFMAELIKHIDTHIEMDFMVVSSYGGGTVSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLLYLRDMFKYRKASSVKIATLFDKPEGRVVDIE-----ADYVCYDVPNEFIVGFGLDYDEKYRNLPYVGVLKEEIY 178          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STRT1 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=hpt PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.870e-27
Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L++Q+ I  +  EL  Q+T D+              GA  F+A+L+++I   I +DF+   SYG GT+SSG   +  D   +++ + VI +EDI+DTG TL  L      + ASSV + TL DKP  R + +E       Y  ++ P+ F+VG+G+D+ E YRNLPYVGVLK E Y
Sbjct:   10 LFSQEDIVTKTKELGQQLTKDY--AGKNPLLVCVLKGAVPFMAELIKHIDTHIEMDFMVVSSYGGGTVSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLLYLRDMFKYRKASSVKIATLFDKPEGRVVDIE-----ADYVCYDVPNEFIVGFGLDYDEKYRNLPYVGVLKEEIY 178          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_RHOCA (Hypoxanthine-guanine phosphoribosyltransferase OS=Rhodobacter capsulatus GN=hpt PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.166e-27
Identity = 64/166 (38.55%), Postives = 101/166 (60.84%), Query Frame = 1
Query:   19 ISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLK 516
            I+ RV  L A+IT  F              G+F+F+ADL+R I +P  VDF+ A SYG+ T S+    +  D +  +  + V++VEDI+DTG T+S ++  L ++    +  C +LDKP+RR++ V+       + GFE PD FVVGYG+D+A+ +RNLP++G ++
Sbjct:   17 IAARVEALGAEITEAFKDTDRLVVVGLLR-GSFVFIADLIREIGVPCEVDFLEASSYGNETTSTREVRVLKDLRGIIGGRDVLVVEDIIDTGHTISKVMEMLRARAPRRIECCAMLDKPSRREVDVK-----ARWTGFEIPDEFVVGYGLDYAQNHRNLPFIGTVR 176          
The following BLAST results are available for this feature:
BLAST of CN181669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_ECOLI2.609e-2940.24Hypoxanthine phosphoribosyltransferase OS=Escheric... [more]
HPRT_ECOL62.609e-2940.24Hypoxanthine phosphoribosyltransferase OS=Escheric... [more]
HPRT_MYCTU4.451e-2940.88Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_MYCBO4.451e-2940.88Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_BUCAP1.295e-2837.72Hypoxanthine phosphoribosyltransferase OS=Buchnera... [more]
HPRT_MYCAV2.209e-2839.23Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_VIBHA3.768e-2839.53Hypoxanthine phosphoribosyltransferase OS=Vibrio h... [more]
HPRT_STRT21.870e-2739.20Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRT11.870e-2739.20Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_RHOCA4.166e-2738.55Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181669 ID=CN181669; Name=CN181669; organism=Citrus sinensis; type=EST; length=641bp
CTTTGGACACAGGACCAAATTTCTCGCCGAGTAACGGAGCTTGCCGCCCA
AATCACCCACGATTTCAACTCCGTTTCCCCGCCGCCTGTCGTCGTGGGTG
TCGCCACCGGAGCGTTTCTCTTCTTGGCTGACCTGGTCAGAAATATTCAC
CTCCCTATCTCCGTTGATTTCATTCGTGCTGAATCCTACGGCTCCGGTAC
TCTCTCCAGTGGAGCCCCTGTTCTTTCCCTCGATTCGAAACTCGATGTTA
AGGACAAGCACGTAATCTTGGTCGAGGACATTGTAGATACAGGAACCACA
TTATCATCTCTTATTGCAAACTTGGTATCCAAAGGAGCATCTTCTGTCTC
AGTCTGCACTCTCCTTGATAAACCAGCCAGAAGAAAGATTCAGGTGGAGC
TAGTGGGTGAAGGAAAGTTCTATCGGGGATTTGAGTGTCCAGATTATTTC
GTTGTGGGCTATGGAATGGACTTCGCTGAATTATATAGGAACCTGCCTTA
TGTTGGAGTGTTGAAGCCTGAATGCTACAAATAATTTTATCCGTCACTGG
CTCTTTGACAGGGCGGTCAATAAACTTATTCTACAAATCCAGACTCTTTG
CAACTTCTACAGATTCTTGGCATTTGGTAATTGATGATAAA
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