CN181617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.331e-11 Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 NK + + K ++ D L RN I + +V G GA E+A + A+ G Q ++AFADAL IP LA+NSG ETL ++ + E+ G+D N E V++ K+Q + T + IL +D+++ Sbjct: 380 NKHTLTQIKDAVRDGLRAVRNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEH-SESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPZ_BOVIN (T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11 Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 NK + + K +I D L +N I + +V G GA E+A + A+ G Q ++AFADAL IP LA+NSG ETL V+ + E+ G+D N E +++ K+Q + T + IL +D+++ Sbjct: 380 NKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEH-SESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPQ_CANAL (T-complex protein 1 subunit theta OS=Candida albicans GN=CCT8 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11 Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = -3 Query: 222 IEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 641 +++ +R+I D + + LI++N ++ G GA EI + A PG+ Q AI++FA A + IP LAE SG E LS + + GI D+ + ++ + V + L K+ I LA IL ID +I Sbjct: 382 LDDIERAIDDGVNSIKGLIKDNRLLPGAGAVEIELMKRITAYQST-PGLLQLAIKSFAKAFEVIPRVLAETSGHDSSEILSKLHAAHAEDTGLRAGI---DIDSGEVADTAVLDILATKKSAIDLAVDATNTILSIDQII 517
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.351e-11 Identity = 43/144 (29.86%), Postives = 74/144 (51.39%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPN-CGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 K IEE +RSI+DA+ + I N+ IV G G+ E+ S + + EQ + +FA AL++IP L+ N+G + L+ ++ + + + G+DC + + + +FE K+ I AT+ +IL ID+ I Sbjct: 381 KQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYSRSICNKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSEQTSDIWYGVDCMEGDIINAYDNCIFEVTKIKRNVIYSATEAACLILSIDETI 524
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 7.422e-11 Identity = 44/144 (30.56%), Postives = 71/144 (49.31%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 NK + + K ++ D L +N I + +V G GA E+A + A+ G Q ++AFADAL IP LA+NSG ETL ++ + E+ G+D N E V++ K+Q + T + IL +D+++ Sbjct: 380 NKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEH-SESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11 Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = -3 Query: 222 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 653 NK + + K +I D L +N I + +V G GA E+A + A+ G Q ++AFADAL IP LA+NSG ETL V+ + E+ G+D + E V++ K+Q + T + IL +D+++ Sbjct: 380 NKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEH-SESGQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CN181617 vs. ExPASy Swiss-Prot
Match: TCPZ_DICDI (T-complex protein 1 subunit zeta OS=Dictyostelium discoideum GN=cct6 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11 Identity = 42/143 (29.37%), Postives = 70/143 (48.95%), Query Frame = -3 Query: 222 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 650 K IE+ K ++ D L +N I + +V GGGA +IA + + G + I+AFADAL +P LA+NSG P++T+ +K Q+ G+D D + +F+ +Q + + +L ID++I Sbjct: 383 KHQIEQIKDALRDGLRAVKNTIEDKCVVPGGGAFQIAAYADLMKFKETITGRTKLGIQAFADALLVVPKTLAQNSGFDPMDTI--IKLQEEYAKGHIVGLDVESGEPMDPVSEGIFDQYSVLKQVYRSSPVIASQLLLIDEII 523 The following BLAST results are available for this feature:
BLAST of CN181617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181617 ID=CN181617; Name=CN181617; organism=Citrus sinensis; type=EST; length=655bpback to top |