CN181605

Overview
NameCN181605
Unique NameCN181605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 46/170 (27.06%), Postives = 86/170 (50.59%), Query Frame = 2
Query:  152 LFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 661
            L H+ G+ V+I+   ++  + L   +  +     C++++++E  NL    +SK  KLDI+  NAGI   +    +     D +++I++N    F+  + A + M+  + G I+  +S        G   Y  SK G++G+ K L+ E+   GI VN V+P  + + M+ K
Sbjct:   25 LLHKLGSHVIISGSNEEKLQSLGKVVKDNYTIEVCNLADKEECRNL----ISKASKLDILVCNAGITSDTLA--IRMKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMTDK 188          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: SRLD_ECOLI (Sorbitol-6-phosphate 2-dehydrogenase OS=Escherichia coli (strain K12) GN=srlD PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11
Identity = 45/157 (28.66%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  167 GAKVVIADVQDKLGEDLADKL----GQDVCY-IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 619
            G +V + D+Q     ++A ++    G+ + Y    D ++E  V+ L       FG++D++  +AGI   +F  I D    D +R + VN +G FL A+  +R+M+    +G I+   S   ++    +  Y+ +K+G +GL + LA +L +YGI V+
Sbjct:   26 GYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAF--ISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH 180          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11
Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 2
Query:  158 HENGAKVVIADVQDK----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 661
            H+ G+ V+I+   ++    LG DL D     VC    +++N +E  NL    V++  KLDI+  NAGI   +    +     D +++I++N    F+  + A + M+  + G I+   S        G   Y  SK G++G+ K LA E+   GI VN V+P  + + M+ K
Sbjct:   27 HKLGSHVIISGSNEEKLKALGNDLKDNYTIKVC----NLTNTEECSNL----VAQIEKLDILVCNAGITKDTLA--IRMKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDMTDK 188          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DRS7B_BOVIN (Dehydrogenase/reductase SDR family member 7B OS=Bos taurus GN=DHRS7B PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11
Identity = 48/178 (26.97%), Postives = 87/178 (48.88%), Query Frame = 2
Query:  152 LFHENGAKVVI----ADVQDKLGEDLADKLGQDV-----CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM 658
            +FH  GA++V+    A+  ++L ++LA      V     C +  D+++   +       +  FG +D++ NNAGI  R  G+I+DT     +R++  N  G     K     M+ +++G ++  +S   +I+     AY  SK+       CL AE+ Q+ I V  +SP  + T +S+
Sbjct:   71 VFHAAGARLVLCGRNAEALEELSQELAASRAPGVQTHKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAGISYR--GAIVDTSPDVDKRVMETNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAEVEQHDIEVTVISPGYIHTNLSL 246          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11
Identity = 59/204 (28.92%), Postives = 93/204 (45.59%), Query Frame = 2
Query:   83 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIAD-VQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA 679
            K LE KV                   ++GA VV++   Q+ +   +A   G+   V    C +   ++   LV  AV+  G +DI+ +NA + +  FG+I+D  +   +++++VN     L  K     M  +  G +L  +S  A      LG   Y +SK  +LGL K LA EL    IRVNC++P  + T  S    +D A
Sbjct:   10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKA 210          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 46/188 (24.47%), Postives = 86/188 (45.74%), Query Frame = 2
Query:   92 EGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 655
            EGK+               E     GAKV+     +   + ++D LG +   +  ++++   + ++++   ++FG++DI+ NNAGI   +   ++     +   +I  N    F  +K   R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+P  + T M+
Sbjct:    4 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT 189          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 46/188 (24.47%), Postives = 86/188 (45.74%), Query Frame = 2
Query:   92 EGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 655
            EGK+               E     GAKV+     +   + ++D LG +   +  ++++   + ++++   ++FG++DI+ NNAGI   +   ++     +   +I  N    F  +K   R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+P  + T M+
Sbjct:    4 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT 189          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 53/182 (29.12%), Postives = 89/182 (48.90%), Query Frame = 2
Query:  161 ENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAPIES 691
            ++GA VVI+  + +  +     L   G  V    C +   ++   LV TA++  G +DI+ +NA + +  FG ++D  +   ++++++N     L  K     M  +  G ++  AS  A    +GLG   Y +SK  ++GL K LA EL    IRVNC++P  + T  S     D A  E+
Sbjct:   36 QDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVATALNLHGGIDILVSNAAV-NPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGP--YNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTSFSKALWEDKAQEEN 214          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: CBR4_MOUSE (Carbonyl reductase family member 4 OS=Mus musculus GN=Cbr4 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 46/169 (27.22%), Postives = 82/169 (48.52%), Query Frame = 2
Query:  149 ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 655
            +L  + G ++ I     ++ +  A +LG +     CD++ E +V +         G ++ + N AGI   S   ++ T   D+   ++ N +G  L  K A + M+ QQ G I+   S       +G  AY+ +K G++G  + LA E+ +  IRVN V+P  + T M+
Sbjct:   20 QLMAQKGYRLAIVSRNLEVAKVTAGELGGNHLAFRCDVAKEQDVQSTFQEMEKHLGPVNFLVNAAGINRDSL--LVRTKTEDMISQLHTNLLGSMLTCKAAMKTMI-QQGGSIVNVGSIIGLKGNVGQSAYSATKGGLVGFSRSLAKEVARKKIRVNVVAPGFIRTDMT 185          
The following BLAST results are available for this feature:
BLAST of CN181605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
FABG_RICCN3.697e-1127.063-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
SRLD_ECOLI4.828e-1128.66Sorbitol-6-phosphate 2-dehydrogenase OS=Escherichi... [more]
FABG_RICBR4.828e-1129.653-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
DRS7B_BOVIN4.828e-1126.97Dehydrogenase/reductase SDR family member 7B OS=Bo... [more]
DHRS4_PIG4.828e-1128.92Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
FABG_SHIFL8.235e-1124.473-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI8.235e-1124.473-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
DHRS4_RABIT8.235e-1129.12Dehydrogenase/reductase SDR family member 4 OS=Ory... [more]
CBR4_MOUSE8.235e-1127.22Carbonyl reductase family member 4 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181605 ID=CN181605; Name=CN181605; organism=Citrus sinensis; type=EST; length=693bp
GGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTTGAAGAAA
AGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGAAGGCAAA
GTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGGCGGTTGA
ACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTCCAGGATA
AGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTGCTACATC
CATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTGATACCGC
CGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCAGGAATTC
TTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGATCTAGAA
CGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCAAGCATGC
TGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTTACAGCTA
GTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATACAATATCC
AAATATGGGATTTTAGGACTAGTAAAGTGCTTGGCAGCAGAGCTTGGACA
GTATGGAATAAGAGTAAATTGCGTCTCGCCTTATGGTTTGGCGACAGGAA
TGTCGATGAAAGGTGGAGTCGATCCGGCTCCTATAGAATCATC
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