CN181605

Overview
NameCN181605
Unique NameCN181605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  152 LFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 661
            L    GA V ++D+ ++LG     ++   G    ++H D++NE+     VDT +++  +LD + NNAGIL  +   + DT   + +R+  +N    FLG +     M    KGCI+  +S    +   G+ AY  SK  +    K  A +L  + IRVN V P  +AT M+ +
Sbjct:   25 LLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFLHLDVTNENHWTGAVDTILAESDRLDALVNNAGIL--TLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQ 195          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  152 LFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 661
            L    GA V ++D+ ++LG     ++   G    ++H D++NE+     VDT +++  +LD + NNAGIL  +   + DT   + +R+  +N    FLG +     M    KGCI+  +S    +   G+ AY  SK  +    K  A +L  + IRVN V P  +AT M+ +
Sbjct:   25 LLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFLHLDVTNENHWTGAVDTILAESDRLDALVNNAGIL--TLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQ 195          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 60/190 (31.58%), Postives = 91/190 (47.89%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT 646
            RLE K                E+F   GA+V+I D+     E+  D   K G      H D+S+E+ V    D      G +DI++NNAG+ D+  G + + P    +R+I V+  G FL +K+   +M+ +  G I+ T+S     A L    Y  +K GI  L K +A +  + GIRVN +SP  + T
Sbjct:    3 RLENKTAVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAIRKNGGQAESFHLDVSDENSVKAFADQIKDACGTIDILFNNAGV-DQEGGKVHEYPVDLFDRIIAVDLRGTFLCSKYLIPLML-ENGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIET 190          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  149 ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAG----ILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            E   + GA V++AD+    G ++A +LG  V ++  D+++E +V   + TA  KFG+LD+  N AG    +   +F   +     D +R+IN+NT+G F   + +A +M         Q+G I+ TAS       +G  AY+ SK  ++G+   +A +L   GIR+  ++P
Sbjct:   22 ERLAKQGASVILADLPSSKGNEVAKELGDKVVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAP 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_ECO5E (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIAGE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_ECO57 (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O157:H7 GN=hcaB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    VD  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIAGE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_ECOSM (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    +D  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRALDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 60/169 (35.50%), Postives = 90/169 (53.25%), Query Frame = 2
Query:  167 GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD-LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV 670
            GA+VV+ADV D+ G   A +LG    Y H D++ E++   +V  A  +FG +D + NNAGI   S G  L+T   +   +++++N  G F+G K     M     G I+  +SA   +    + +Y  SK+G+ GL K  A ELG   IRVN V P    T M+ + G+
Sbjct:   30 GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI---STGMFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI 195          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_ECOLU (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    V+  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVNQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 53/174 (30.46%), Postives = 91/174 (52.30%), Query Frame = 2
Query:  167 GAKVVIADVQDKLGED--LADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 676
            G KVV+   Q     D  +A+ +  G +   +  +++N DEV  L+ T + KF ++D++ NNAGI   +   +L     D + +I++N  G FL  K  +++M+ Q+ G I+   S    +   G   Y+ +K G++G  K +A EL   G+ VN V+P  +AT M+     +P
Sbjct:   30 GMKVVVNYAQSSTAADAVVAEIIANGGEAIAVQANVANADEVDQLIKTTLDKFSRIDVLVNNAGITRDTL--LLRMKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTENLNAEP 201          
The following BLAST results are available for this feature:
BLAST of CN181605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CPNA_COMTE2.024e-1730.64Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS92.024e-1730.64Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
YXBG_BACSU2.643e-1731.58Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
HCD2_DROME3.452e-1730.993-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]
HCAB_ECO5E3.452e-1734.103-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECO573.452e-1734.103-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECOSM4.508e-1733.533-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HSD_STREX5.888e-1735.503-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HCAB_ECOLU7.690e-1733.533-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
FABG1_SYNY37.690e-1730.463-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181605 ID=CN181605; Name=CN181605; organism=Citrus sinensis; type=EST; length=693bp
GGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTTGAAGAAA
AGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGAAGGCAAA
GTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGGCGGTTGA
ACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTCCAGGATA
AGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTGCTACATC
CATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTGATACCGC
CGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCAGGAATTC
TTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGATCTAGAA
CGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCAAGCATGC
TGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTTACAGCTA
GTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATACAATATCC
AAATATGGGATTTTAGGACTAGTAAAGTGCTTGGCAGCAGAGCTTGGACA
GTATGGAATAAGAGTAAATTGCGTCTCGCCTTATGGTTTGGCGACAGGAA
TGTCGATGAAAGGTGGAGTCGATCCGGCTCCTATAGAATCATC
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