CN181605

Overview
NameCN181605
Unique NameCN181605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCAB_ECO7I (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 57/173 (32.95%), Postives = 89/173 (51.45%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            VE F E GA+V   ++       L  + G+ +  +  +++   +    +D  +++ GKLD    NAGI D +  S+++TP   LE     L NVN +G  L AK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   23 VERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRALDQILTRSGKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLSAKACAPALIASE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16
Identity = 48/139 (34.53%), Postives = 80/139 (57.55%), Query Frame = 2
Query:  257 DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 673
            D+S E++V  ++ TAV  +G +DI+ NNAGI     G ++   KS  + +I++N  G FL  + AA++M+ ++KG I+  AS    +   G   Y+ +K G++G  K +A E     I VN V+P  +++ M+ K G D
Sbjct:  135 DVSKEEDVEAMIKTAVDAWGTVDILVNNAGI--TRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDD 271          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16
Identity = 67/212 (31.60%), Postives = 104/212 (49.06%), Query Frame = 2
Query:   80 FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI--ADVQDKLGEDLAD--KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---APIES 691
            +K LEGKV                 F    AKVV+     +D+    L +  K+G +   +  D++ E +VINLV +A+ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES
Sbjct:    2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVES 211          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 58/196 (29.59%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQ----DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 661
            RLEGKV                LF + GA V+  D+     D L ++     G+   Y+  ++++ D++  +V+  V K+G++D++ NNAGI   +   ++   + D + +INVN  G F   +     M+ Q+ G I+  +S        G   Y  SK G++G+ K  A EL    IRVN V+P  + T M+ K
Sbjct:    2 RLEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYV-LNVTDRDQIKEVVEKVVQKYGRIDVLVNNAGITRDAL--LVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEK 194          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 655
            V+LF ENGA V I  + ++ G+ + + L   G +V +   D+S+   V + V   + K  K+DI+ NNAGI   +   ++   + D + +I+ N    +       R M+  + G I+  AS   +I   G   Y  +K GI+   K LA E+    IRVNC++P  + T M+
Sbjct:   24 VKLFLENGADVEIWGLNEERGQAVIESLTGLGGEVSFARVDVSHNGGVKDCVQKFLDKHNKIDILVNNAGITRDNL--LMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMT 194          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15
Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            V++F  NG  VV  D+ D    +L   LG+    +  D+S ED+V+ L      +F +++++ NNAGI   +  +  DT   D +R + +N +G +  A   A++M P     I+  AS    +      AY  SK G++ + K LA      GIRV  V+P  + T M
Sbjct:   26 VDIFAANGDVVVAVDLPDSGVIELGQNLGEPHLGLEVDVSREDDVVALRALLEKRFSRIEVLVNNAGI-GPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKP--GAAIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPM 191          

HSP 2 Score: 68.1662 bits (165), Expect = 4.828e-11
Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 2
Query:  155 FHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            F ENG  VVIAD   +    LA  LG        D + E EV++L +    +FG LD+  N  G+ +    +  ++P+  L+R+++VN  G F   + AA   +  + G ++    A   ++ L  S AY     GI  L +C AAELG  GIR   V+P
Sbjct:  297 FAENGDTVVIADGDGEEAVKLAGLLGDKHLSRRVDRTVETEVVSLFEELRERFGHLDVFVN--GMNEILVPNTEESPEV-LKRILDVNLTGAFTCVREAA---ISMRSGSVILNLGASLSLSPLAPSHAYGAYNAGIDMLTRCTAAELGPLGIRTATVAP 450          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 2
Query:  257 DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 673
            D+S E +V +++ TAV K+G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D
Sbjct:  132 DVSKEADVDSMMKTAVDKWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED 268          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 67/214 (31.31%), Postives = 104/214 (48.60%), Query Frame = 2
Query:   80 FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACT-EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---APIES 691
            +K LEGKV                 F    AKVV+      D  + + E+   K+G +   +  D++ E +VINLV +A+ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S    +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES
Sbjct:    2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVES 213          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 65/212 (30.66%), Postives = 104/212 (49.06%), Query Frame = 2
Query:   80 FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI--ADVQDKLGEDLAD--KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---APIES 691
            +K LEGKV                 F    AKVV+     +++    L +  K+G +   +  D++ E +VINLV +++ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES
Sbjct:    2 YKDLEGKVVVITGSSTGLGKAMAIRFATEKAKVVVNYRSKEEEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSSIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVES 211          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15
Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLG---QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 655
            +L GK                 +F  +GA +++ D+ D++ E LAD+LG        +  D+ +   V   V  A    G++DI+ NNAG+     G+ LD  + D +  I++N  G +   K     M+ ++ G I+  +S   + +A  G  AY +SK  I+GL K LA E  Q GIRVN + P  + T M+
Sbjct:    3 KLTGKTALITGASQGIGEGIARVFARHGANLILLDISDEI-EKLADELGGRGHRCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVC--RLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA 193          
The following BLAST results are available for this feature:
BLAST of CN181605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HCAB_ECO7I2.237e-1632.953-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
FABG_CUPLA3.817e-1634.533-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
DHG_BACME3.817e-1631.60Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]
FABG_THEMA4.985e-1629.593-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
FABG_CHLPN6.510e-1630.643-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
Y4VI_RHISN2.474e-1530.77Uncharacterized short-chain type dehydrogenase/red... [more]
FABG5_BRANA3.231e-1534.533-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
DHGB_BACME3.231e-1531.31Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
DHG1_BACME3.231e-1530.66Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
UCPA_SALTY4.220e-1530.41Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181605 ID=CN181605; Name=CN181605; organism=Citrus sinensis; type=EST; length=693bp
GGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTTGAAGAAA
AGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGAAGGCAAA
GTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGGCGGTTGA
ACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTCCAGGATA
AGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTGCTACATC
CATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTGATACCGC
CGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCAGGAATTC
TTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGATCTAGAA
CGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCAAGCATGC
TGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTTACAGCTA
GTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATACAATATCC
AAATATGGGATTTTAGGACTAGTAAAGTGCTTGGCAGCAGAGCTTGGACA
GTATGGAATAAGAGTAAATTGCGTCTCGCCTTATGGTTTGGCGACAGGAA
TGTCGATGAAAGGTGGAGTCGATCCGGCTCCTATAGAATCATC
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