CN181605

Overview
NameCN181605
Unique NameCN181605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  257 DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 673
            D+S E +V  ++ TA+  +G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D
Sbjct:  130 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED 266          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 2
Query:  257 DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 673
            D+S E +V  ++ TA+  +G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D
Sbjct:  135 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED 271          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 54/187 (28.88%), Postives = 89/187 (47.59%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT 646
            R  GKV              V  F E+GA+VVI D  +  G  +  +L   V ++ CD++ E++V  LV   + +FG+LD + NNAG          +T      +L+ +N +G +   K  A   + + +G ++  +S    I    +  Y  +K  +  + K LA +  QYG+RVNC+SP  + T
Sbjct:    6 RYAGKVVIVTGGGRGIGAGIVRAFVESGAQVVICDKDEARGRAVERELPGTV-FLLCDVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWP-EETSAQGFRQLLELNLLGTYTLTK-LALPHLRKSRGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWT 189          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: DHB14_HUMAN (17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 56/187 (29.95%), Postives = 86/187 (45.99%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT 646
            R  GKV              V  F  +GA+VVI D  +  G  L  +L   V +I CD++ ED+V  LV   + +FG+LD + NNAG          +T      +L+ +N +G +   K A   +   Q G ++  +S    I    +  Y  +K  +  + K LA +   YG+RVNC+SP  + T
Sbjct:    6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAV-FILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWT 189          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 55/171 (32.16%), Postives = 82/171 (47.95%), Query Frame = 2
Query:  149 ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH----CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAG--LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            ELF  +GA+V I D+     +  A  L       H    CD+++     +  D  +S FG  +I+ NNAGI        LD   +D +R++ VN      G  + ++V +P  +    G I   +S   +  G   G P Y+ +K G+LGL K +A E G   IRVNCV+P
Sbjct:   25 ELFASHGARVAILDINADEAKAAAGDLPPVEHGAHIGLRCDVADRASCTSASDEVLSAFGVANILINNAGITQPV--KTLDISDADWQRIVAVN----MTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTP 189          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCD2_MOUSE (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus GN=Hsd17b10 PE=1 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 58/170 (34.12%), Postives = 82/170 (48.24%), Query Frame = 2
Query:  167 GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK----SDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT 646
            GA  V+ DV D  GE  A KLG+   +   ++++E E+   +  A  KFG++D+  N AGI            K     D +R+INVN IG F   +  A  M         Q+G I+ TAS       +G  AY+ SK GI G+   +A +L   GIRV  ++P   AT
Sbjct:   34 GATAVLLDVPDSEGESQAKKLGESCIFAPANVTSEKEIQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHQKKNKIHTLEDFQRVINVNLIGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIDGMTLPIARDLAPTGIRVVTIAPGLFAT 203          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 52/174 (29.89%), Postives = 92/174 (52.87%), Query Frame = 2
Query:  167 GAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 673
            G KV++     A   +++ + + +  GQ + +   D+S E +V  ++ TAV K+G +D++ NNAG        ++   KS  + ++++N  G FL ++ A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D
Sbjct:   38 GCKVLVNYARSAKEAEEVSKQIEEYGGQAITF-GGDVSKEADVDAMMKTAVDKWGTIDVVVNNAGDT-----LLIRMKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED 205          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: Y1627_STAS1 (Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 2
Query:  146 VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH-CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD-LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG--IRVNCVSPYGLATGMS 655
            V L  ENGAK+V+   +    E +  K+G D   I   D++  DEV  L++TA + FG++D++ NNAG++ +SF   L+  K D   ++I+VN  G   G       M  Q+ G I+  AS    +   GS  Y  +KY +  + + L  E    G  IR   +SP  ++T ++
Sbjct:   23 VNLLSENGAKLVLGARRLDRLEKIQQKVGHDSVSIKKTDVTKPDEVNALIETAYNDFGRIDVLINNAGLMPQSF---LEKNKQDEWNQMIDVNIKGVLYGIGAVLPYMRKQKSGHIINLASVAGHVVFPGSAVYCGTKYAVRAITEGLRQEEAIVGSNIRTTILSPGAVSTELT 193          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: 3BHD_COMTE (3-beta-hydroxysteroid dehydrogenase OS=Comamonas testosteroni PE=1 SV=5)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 56/194 (28.87%), Postives = 90/194 (46.39%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL---DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YGIRVNCVSPYGLATGM 652
            RL+GKV              V+L    GAKV  +D+ +  G+ LA +LG+   ++  D+S+E +   ++     + G L+++ NNAGIL   D   G +      D  RL+ +NT   F+G +     M  +  G I+  AS  + +       Y+ SK  +  L +  A    +  Y IRVN + P G+ T M
Sbjct:    4 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRL-----EDFSRLLKINTESVFIGCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM 191          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: TODD_PSEP1 (Cis-toluene dihydrodiol dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=todD PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 63/197 (31.98%), Postives = 88/197 (44.67%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTP----KSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG 664
            RLEG+V              V+ +   GA+V + D      E L    G  +  +  D+ + D     V   V  FGKLD +  NAG+ D     ++D P        E +  VN  G  L AK AA   + Q KG  +FT S      G G   YT  K+ ++GL+K LA E G   IRVN ++P G+  G  ++G
Sbjct:    2 RLEGEVALVTGGGAGLGRAIVDRYVAEGARVAVLDKSAAGLEALRKLHGDAIVGVEGDVRSLDSHREAVARCVEAFGKLDCLVGNAGVWDY-LTQLVDIPDDLISEAFEEMFEVNVKGYILAAK-AALPALYQSKGSAIFTVSNAGFYPGGGGVLYTAGKHAVIGLIKQLAHEWGP-RIRVNGIAPGGI-LGSDLRG 194          
The following BLAST results are available for this feature:
BLAST of CN181605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
FABG3_BRANA4.665e-1433.093-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG1_BRANA4.665e-1433.093-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
DHB14_BOVIN4.665e-1428.8817-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
DHB14_HUMAN6.093e-1429.9517-beta-hydroxysteroid dehydrogenase 14 OS=Homo sa... [more]
Y4MP_RHISN7.958e-1432.16Uncharacterized short-chain type dehydrogenase/red... [more]
HCD2_MOUSE7.958e-1434.123-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musc... [more]
FABG4_BRANA7.958e-1429.893-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
Y1627_STAS11.039e-1332.18Uncharacterized oxidoreductase SSP1627 OS=Staphylo... [more]
3BHD_COMTE1.039e-1328.873-beta-hydroxysteroid dehydrogenase OS=Comamonas t... [more]
TODD_PSEP11.357e-1331.98Cis-toluene dihydrodiol dehydrogenase OS=Pseudomon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181605 ID=CN181605; Name=CN181605; organism=Citrus sinensis; type=EST; length=693bp
GGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTTGAAGAAA
AGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGAAGGCAAA
GTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGGCGGTTGA
ACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTCCAGGATA
AGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTGCTACATC
CATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTGATACCGC
CGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCAGGAATTC
TTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGATCTAGAA
CGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCAAGCATGC
TGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTTACAGCTA
GTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATACAATATCC
AAATATGGGATTTTAGGACTAGTAAAGTGCTTGGCAGCAGAGCTTGGACA
GTATGGAATAAGAGTAAATTGCGTCTCGCCTTATGGTTTGGCGACAGGAA
TGTCGATGAAAGGTGGAGTCGATCCGGCTCCTATAGAATCATC
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