CN181605

Overview
NameCN181605
Unique NameCN181605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: BNZE_PSEPU (Cis-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Pseudomonas putida GN=bnzE PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 63/197 (31.98%), Postives = 88/197 (44.67%), Query Frame = 2
Query:   86 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTP----KSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG 664
            RLEG+V              V+ +   GA+V + D      E L    G  +  +  D+ + D     V   V  FGKLD +  NAG+ D     ++D P        E +  VN  G  L AK AA   + Q KG  +FT S      G G   YT  K+ ++GL+K LA E G   IRVN ++P G+  G  ++G
Sbjct:    2 RLEGEVALVTGGGAGLGRAIVDRYVAEGARVAVLDKSAAGLEALRKLHGDAIVGVEGDVRSLDSHREAVARCVEAFGKLDCLVGNAGVWDY-LTQLVDIPDDLISEAFEEMFEVNVKGYILAAK-AALPALYQSKGSAIFTVSNAGFYPGGGGVLYTAGKHAVIGLIKQLAHEWGP-RIRVNGIAPGGI-LGSDLRG 194          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 45/155 (29.03%), Postives = 82/155 (52.90%), Query Frame = 2
Query:  197 DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 661
            +K+ E++   LG    +   D+ + D+V   V     + G +DI+ NNAGI    FG  LD    + E +I VN +G +   +     M+ ++ G I+  +S   +     + AY+ SK+ +LGL + L  E+ ++ IRV+ ++P  +A+ MS++
Sbjct:   44 EKVAEEVK-ALGVKAAFAAADVKDADQVNQAVAQVKEQLGDIDILINNAGI--SKFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIE 195          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FOX2_CANTR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 61/192 (31.77%), Postives = 91/192 (47.40%), Query Frame = 2
Query:   65 SSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGE-DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 634
            +S AP   L+ KV               + F + GAKVV+ D +D     D     G +      D++ + E I  +   + K+G +DI+ NNAGIL DRSF  +    K + + +  V+ IG F  ++ A    V +Q G I+   S        G   Y+ SK GILGL K +A E  +  I+VN V+P+
Sbjct:  312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAI--IKNVIDKYGTIDILVNNAGILRDRSFAKM---SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: Y2778_STAA8 (Uncharacterized oxidoreductase SAOUHSC_02778 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02778 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 52/161 (32.30%), Postives = 85/161 (52.80%), Query Frame = 2
Query:  152 LFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            L HE GAKVV+A    +  +++A++L QD V  +  D++N++EV  L+  A   FG LDI+ N+AG +  S   I D    + + +I+VN  G    A+ A   M+ Q  G ++  AS         S  Y+ +K  +  + + L  EL + G++V  +SP
Sbjct:   25 LLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISP 183          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: Y2488_STAAC (Uncharacterized oxidoreductase SACOL2488 OS=Staphylococcus aureus (strain COL) GN=SACOL2488 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 52/161 (32.30%), Postives = 85/161 (52.80%), Query Frame = 2
Query:  152 LFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            L HE GAKVV+A    +  +++A++L QD V  +  D++N++EV  L+  A   FG LDI+ N+AG +  S   I D    + + +I+VN  G    A+ A   M+ Q  G ++  AS         S  Y+ +K  +  + + L  EL + G++V  +SP
Sbjct:   25 LLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISP 183          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 52/161 (32.30%), Postives = 85/161 (52.80%), Query Frame = 2
Query:  152 LFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            L HE GAKVV+A    +  +++A++L QD V  +  D++N++EV  L+  A   FG LDI+ N+AG +  S   I D    + + +I+VN  G    A+ A   M+ Q  G ++  AS         S  Y+ +K  +  + + L  EL + G++V  +SP
Sbjct:   25 LLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSS--KITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISP 183          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: HCD2_HUMAN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 53/165 (32.12%), Postives = 84/165 (50.91%), Query Frame = 2
Query:  167 GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKS----DLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 631
            GA  V+ D+ +  GE  A KLG +  +   D+++E +V   +  A  KFG++D+  N AGI   S    L   ++    D +R+++VN +G F   +  A  M         Q+G I+ TAS       +G  AY+ SK GI+G+   +A +L   GIRV  ++P
Sbjct:   34 GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 198          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: RIDH_KLEAE (Ribitol 2-dehydrogenase OS=Klebsiella aerogenes GN=rbtD PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 45/162 (27.78%), Postives = 79/162 (48.77%), Query Frame = 2
Query:  167 GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 652
            GAKVV+ D + +    L  +LG++   +  D+   D+V NL+   +   G+LDI + NAG      G + +      +R++++N    F   +     ++ Q+ G I+FTA     +  +  P YT SK+ +   V     ++ QYG+RV  V P  + T +
Sbjct:   38 GAKVVLIDREGEKLNKLVAELGENAFALQVDLMQADQVDNLLQGILQLTGRLDIFHANAGAYIG--GPVAEGDPDVWDRVLHLNINAAFRCVRSVLPHLIAQKSGDIIFTAVIAGVVPVIWEPVYTASKFAVQAFVHTTRRQVAQYGVRVGAVLPGPVVTAL 197          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 2
Query:  227 LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT 646
            LG+    +  D+   D +  L+D AV++FG +DI+ NNAG++ R     L+  + D + ++N+N    F  ++ AA+  + Q   G I+  AS  +   G+  P+YT SK G++G+ + +A E  ++ I VN ++P  +AT
Sbjct:   55 LGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRRE--DALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMAT 193          
BLAST of CN181605 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 48/189 (25.40%), Postives = 88/189 (46.56%), Query Frame = 2
Query:   89 LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 655
            LEGKV               EL  E GAKV+     +   + ++D LG +   +  +++N + +  ++     +FG +DI+ NNAGI   +   ++   + +   ++  N    F  +K   R M+ +++G I+   S    +   G   Y  +K G++G  K +A E+   G+ VN V+P  + T M+
Sbjct:    3 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT 189          
The following BLAST results are available for this feature:
BLAST of CN181605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
BNZE_PSEPU1.357e-1331.98Cis-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=P... [more]
YOXD_BACSU1.773e-1329.03Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
FOX2_CANTR1.773e-1331.77Peroxisomal hydratase-dehydrogenase-epimerase OS=C... [more]
Y2778_STAA82.315e-1332.30Uncharacterized oxidoreductase SAOUHSC_02778 OS=St... [more]
Y2488_STAAC2.315e-1332.30Uncharacterized oxidoreductase SACOL2488 OS=Staphy... [more]
Y2422_STAA32.315e-1332.30Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
HCD2_HUMAN2.315e-1332.123-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sap... [more]
RIDH_KLEAE3.024e-1327.78Ribitol 2-dehydrogenase OS=Klebsiella aerogenes GN... [more]
KDUD_ECOLI3.024e-1331.912-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
FABG_VIBCH3.950e-1325.403-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181605 ID=CN181605; Name=CN181605; organism=Citrus sinensis; type=EST; length=693bp
GGTTCCTAACACCCTCTCTGCTTTTAATTAGTTTCAGGTTTTTGAAGAAA
AGATGAACGGCCCTTCTTCTGCAGCTCCCTTCAAAAGGTTAGAAGGCAAA
GTGGCAATCATCACCGGAGGAGCAAGCGGCATCGGAGCAATGGCGGTTGA
ACTCTTCCATGAAAATGGCGCCAAAGTTGTTATTGCCGATGTCCAGGATA
AGCTTGGCGAAGACCTTGCTGATAAGCTGGGCCAAGATGTTTGCTACATC
CATTGTGATATCTCAAATGAAGATGAAGTCATCAATCTCGTTGATACCGC
CGTTTCTAAATTTGGAAAGCTCGATATCATGTACAACAATGCAGGAATTC
TTGACCGCAGCTTTGGGAGCATTTTGGACACTCCAAAGTCTGATCTAGAA
CGCTTAATTAATGTAAACACTATAGGTGGTTTCTTAGGAGCCAAGCATGC
TGCAAGAGTCATGGTGCCACAGCAAAAAGGTTGCATACTGTTTACAGCTA
GTGCTTGTACAGAAATTGCAGGGCTTGGCTCCCCTGCTTATACAATATCC
AAATATGGGATTTTAGGACTAGTAAAGTGCTTGGCAGCAGAGCTTGGACA
GTATGGAATAAGAGTAAATTGCGTCTCGCCTTATGGTTTGGCGACAGGAA
TGTCGATGAAAGGTGGAGTCGATCCGGCTCCTATAGAATCATC
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