CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.702e-18
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = -3
Query:  188 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-NLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 697
            +LD + NNAGIL  +   + DT   + +R+  +N    FLG +     M    KGCI+  +S    +   G+ AY  SK  +    K  A +L  + IRVN V P  +AT M+ +    P   +S+ + +G  L G+  +   ++ A L+L SDE+S+V G  LVVDGG++
Sbjct:   83 RLDALVNNAGIL--TLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAP---QSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYT 248          

HSP 2 Score: 22.3274 bits (46), Expect = 4.702e-18
Identity = 7/22 (31.82%), Postives = 15/22 (68.18%), Query Frame = -2
Query:  705 YIHCDISNEDEVINLVDTAVSK 770
            ++H D++NE+     VDT +++
Sbjct:   59 FLHLDVTNENHWTGAVDTILAE 80          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.702e-18
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = -3
Query:  188 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-NLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 697
            +LD + NNAGIL  +   + DT   + +R+  +N    FLG +     M    KGCI+  +S    +   G+ AY  SK  +    K  A +L  + IRVN V P  +AT M+ +    P   +S+ + +G  L G+  +   ++ A L+L SDE+S+V G  LVVDGG++
Sbjct:   83 RLDALVNNAGIL--TLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAP---QSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYT 248          

HSP 2 Score: 22.3274 bits (46), Expect = 4.702e-18
Identity = 7/22 (31.82%), Postives = 15/22 (68.18%), Query Frame = -2
Query:  705 YIHCDISNEDEVINLVDTAVSK 770
            ++H D++NE+     VDT +++
Sbjct:   59 FLHLDVTNENHWTGAVDTILAE 80          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.086e-18
Identity = 59/172 (34.30%), Postives = 94/172 (54.65%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 700
            G++D++ NNAGI   +   ++   + D + +INVN  G F   +     M+ Q+ G I+  +S        G   Y  SK G++G+ K  A EL    IRVN V+P  + T M+ K  +     E+++S++    G+F K + +A   L+LASDESSYV+GQ + +DGG  +
Sbjct:   81 GRIDVLVNNAGITRDAL--LVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEK--LPEKARETALSRIP--LGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGGLVI 246          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.947e-18
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE-LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LD++ NNAGI       I +   SD  +++NVN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L          + ++ IRVNCV P  + T ++ K     + +E++   +  +K +  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:   79 GGLDVLINNAGI--EIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 252          

HSP 2 Score: 25.0238 bits (53), Expect = 7.947e-18
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = -2
Query:  699 GEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFG 809
            GE +  K   D + ++  DI+NE    N + +AV KFG
Sbjct:   42 GEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFG 79          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.343e-17
Identity = 64/180 (35.56%), Postives = 94/180 (52.22%), Query Frame = -3
Query:  185 NLGKLDIMYNNAGILDRSFGSILDTPKS----DLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQ-FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 706
            + G LD+M NN+G     F  +   P      D +R+I+VN  G FLGAK A   M+    KG +L  +S   +I    +  Y+ SK GI  + + LA      GIRVN ++P  +AT    +  VD    ES   Q+  +  + F K + +A AA +L S+E+SYV+G  L VDGG ++
Sbjct:   82 HFGTLDVMVNNSG-----FNGVEAMPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIAT----ESNVDTKKEESRQKQLKKIPMKAFGKPEEVAAAAAWLVSEEASYVTGATLFVDGGMTL 252          

HSP 2 Score: 24.2534 bits (51), Expect = 1.343e-17
Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = -2
Query:  699 IHCDISNEDEVINLVDTAVSKFG 767
            +  D+S E+ +  L+DTA+  FG
Sbjct:   62 VEADVSKEEGIQALLDTALEHFG 84          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.955e-17
Identity = 56/172 (32.56%), Postives = 94/172 (54.65%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS--MKGGV-DPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD+M NNAGI   +  ++    +   +++I V+  G + G + AA +M  +++G I+  +S   ++  +G   Y+ +K GI+G+ K  A EL   GIRVN ++P  + + M+  M   + D  L E  M + G       +   +A+ A++LASD SSY++G  L V GG
Sbjct:   82 GGLDVMVNNAGITRDA--TMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAG-------EPSEVASVAVFLASDLSSYMTGTVLDVTGG 244          

HSP 2 Score: 28.8758 bits (63), Expect = 2.955e-17
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = -2
Query:  699 EDLADKLGQD--VCYIHCDISNEDEVINLVDTAVSKFG 806
            E  A +LG D     + CD++  D+V  L+ TAV +FG
Sbjct:   45 EVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFG 82          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.955e-17
Identity = 56/172 (32.56%), Postives = 94/172 (54.65%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS--MKGGV-DPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD+M NNAGI   +  ++    +   +++I V+  G + G + AA +M  +++G I+  +S   ++  +G   Y+ +K GI+G+ K  A EL   GIRVN ++P  + + M+  M   + D  L E  M + G       +   +A+ A++LASD SSY++G  L V GG
Sbjct:   82 GGLDVMVNNAGITRDA--TMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAG-------EPSEVASVAVFLASDLSSYMTGTVLDVTGG 244          

HSP 2 Score: 28.8758 bits (63), Expect = 2.955e-17
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = -2
Query:  699 EDLADKLGQD--VCYIHCDISNEDEVINLVDTAVSKFG 806
            E  A +LG D     + CD++  D+V  L+ TAV +FG
Sbjct:   45 EVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFG 82          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BDH2_MOUSE (3-hydroxybutyrate dehydrogenase type 2 OS=Mus musculus GN=Bdh2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.517e-17
Identity = 58/184 (31.52%), Postives = 96/184 (52.17%), Query Frame = -3
Query:  185 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------------GQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 697
            ++D+++N AG +    G+ILD  + D +  +N+N    FL  K     M+ Q+ G I+  +S  + I G+ +   Y+ +K  ++GL K +AA+  Q GIR NCV P          G VD   ++  +    N K            G+F   + +A   +YLASDES+YV+G  +++DGG+S+
Sbjct:   74 RIDVLFNVAGFVHH--GTILDCEEKDWDFSMNLNVRSMFLMIKAFLPKMLAQKSGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQGIRCNCVCP----------GTVDTPSLQERIQARDNPKEALKTFLNRQKTGRFASAEEVALLCVYLASDESAYVTGNPVIIDGGWSL 245          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BDH2_HUMAN (3-hydroxybutyrate dehydrogenase type 2 OS=Homo sapiens GN=BDH2 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.517e-17
Identity = 57/184 (30.98%), Postives = 97/184 (52.72%), Query Frame = -3
Query:  185 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------------GQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 697
            +LD+++N AG +    G++LD  + D +  +N+N    +L  K     M+ Q+ G I+  +S  + + G+ +   Y+ +K  ++GL K +AA+  Q GIR NCV P          G VD   ++  +   GN +            G+F   + IA   +YLASDES+YV+G  +++DGG+S+
Sbjct:   74 RLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP----------GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.985e-17
Identity = 59/175 (33.71%), Postives = 89/175 (50.86%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            GKLD+M NNAG+ +    S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   + + IA  A +LAS E+SYV+G  L  DGG +
Sbjct:   84 GKLDVMINNAGLENPV--SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251          

HSP 2 Score: 31.5722 bits (70), Expect = 4.985e-17
Identity = 13/32 (40.62%), Postives = 22/32 (68.75%), Query Frame = -2
Query:  696 KLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 791
            K+G +   +  D++ E +VINLV +A+ +FGK
Sbjct:   54 KVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CPNA_COMTE4.702e-1833.92Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS94.702e-1833.92Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
FABG_THEMA7.086e-1834.303-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
BACC_BACAM7.947e-1833.70Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
DHG2_BACSU1.343e-1735.56Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
Y1385_MYCBO2.955e-1732.56Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU2.955e-1732.56Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
BDH2_MOUSE3.517e-1731.523-hydroxybutyrate dehydrogenase type 2 OS=Mus musc... [more]
BDH2_HUMAN3.517e-1730.983-hydroxybutyrate dehydrogenase type 2 OS=Homo sap... [more]
DHG_BACME4.985e-1733.71Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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