CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCAB_ECO5E (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hcaB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  362 GKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 700
            GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   79 GKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIAGE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HCAB_ECO57 (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Escherichia coli O157:H7 GN=hcaB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12
Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  362 GKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 700
            GKLD    NAGI D +  S+++TP   LE     L NVN +G  LGAK  A  ++  + G ++FT S      G G P YT SK+   GL++ LA EL    +RVN V P G+A+ +
Sbjct:   79 GKLDCFIGNAGIWDHN-ASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIAGE-GSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAP-KVRVNGVGPCGMASDL 192          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: GRDH_ORYSJ (Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12
Identity = 57/180 (31.67%), Postives = 90/180 (50.00%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG-----CILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL--KGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 700
            G +DI+ NNA        SI D  + DLER+   N    F  +KHA + M  ++ G     C +   S+     G  +   YT +K  I+   + LA +L + GIRVN V+P  + T +     +  +  E  + Q G+    G+  +   +A + ++LASD++SY+SGQ L V+GG  V
Sbjct:  125 GAIDILVNNAAE-QYERPSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPIWTPL-----IPASFAEEKVRQFGSQVPMGRAGQPSEVAPSFVFLASDDASYMSGQMLHVNGGVIV 298          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_BUCAI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fabG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = -3
Query:  182 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 694
            +DI+ NNAGI + +   +++   ++ + +I  N    F   K   R M+ +++G I+   S        G   Y+ SK G++G  K LA E+   GI VN VSP  + T  + K  ++    +  +S +   +  F + + +A+A ++LAS ++SY++G  L V+GG  ++
Sbjct:   80 IDILINNAGIKEDNL--LVNMKSTEWDDVIKTNLSSVFHLVKSVIRSMIKKRQGRIITIGSVIAYTGNKGQVNYSASKSGLIGFHKSLALEVASKGITVNIVSPGLIKTNFTEK--LNSIQYQKYLSNIPMKR--FGQKEEVADAVIFLASKKASYITGHTLHVNGGMYMI 244          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YLX6_SCHPO (Uncharacterized oxidoreductase C922.06 OS=Schizosaccharomyces pombe GN=SPAC922.06 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 55/188 (29.26%), Postives = 89/188 (47.34%), Query Frame = -3
Query:  164 LGKLDIMYNNAGILDRSFGSILDTPKSDL-----ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP---YGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTIMR 703
            LG +D++ NNAG+ D       DTP   L     +  +++   G +L  ++    M  Q KG  +    +      LGSPAY+ +K G+  L K LA   G  GIRVN  +P   +  A     K   D   +   M +   + G+    + +A A ++LA  ++S+++G  L VDGG    NP +++
Sbjct:   71 LGPIDVLINNAGLAD-------DTPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSPAYSAAKAGLENLTKALAVRYGPLGIRVNVCAPGTIWSPAWDERFKKHPD---VGDRMKRWYPV-GRLGTPEDVARAVIFLADSKNSFITGTTLYVDGGLLAGNPCLIQ 247          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: VER1_ASPPA (Versicolorin reductase OS=Aspergillus parasiticus GN=ver1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 58/181 (32.04%), Postives = 91/181 (50.28%), Query Frame = -3
Query:  194 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---------PALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 706
            + G LDI+ +NAGI+  SFG + D    + +R+  VNT G F  A+ A R M  ++ G I+ T+S    + G+   A Y+ SK  I   V+C+A + G   I VN V+P  + T M +    +            ++   + +  L    L  D +A    +LASD + +VSG+ + VDGG
Sbjct:   84 HFGYLDIVSSNAGIV--SFGHLKDVTPEEFDRVFRVNTRGQFFVAREAYRHM--REGGRIILTSSNTACVKGVPKHAVYSGSKGAIDTFVRCMAIDCGDKKITVNAVAPGAIKTDMFLAVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPVD-VARVVSFLASDTAEWVSGKIIGVDGG 259          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: NODG_AZOBR (Nodulation protein G OS=Azospirillum brasilense GN=nodG PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 54/176 (30.68%), Postives = 88/176 (50.00%), Query Frame = -3
Query:  188 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM--KGGVDPALIES-SMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 706
            +LG +DI+ NNAGI    F + +D  K+  + +I  N    F   +  +  M  +  G I+  +S        G   Y+ +K G++G  K LAAEL   G+ VN ++P  + T M M  +  +  A+ +S  M ++G       + D I  A  YLAS+ + YV+G  L ++GG +
Sbjct:   78 DLGPVDILVNNAGITRDKFFAKMD--KAQWDAVIATNLSSLFNVTQQVSPKMAERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAELATKGVTVNAIAPGYIGTDMVMAIREDIRQAITDSVPMKRLG-------RPDEIGGAVSYLASEIAGYVTGSTLNINGGLN 244          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 50/174 (28.74%), Postives = 92/174 (52.87%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GQFLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 700
            G +D++ NNAGI   +   ++   +S  + +I +N  G FL  + A ++M+ +++G I+  +S    I  +G   Y  +K G++   K  A E     I VN V P  +A+ M+ + G D   +E  +  +G +  G++ K + +A    +LA S  +SY++GQ   +DGG ++
Sbjct:  153 GTIDVVVNNAGITRDTL--LIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAELGED---MEKKI--LGTIPLGRYGKAEEVAGLVEFLALSPAASYITGQAFTIDGGIAI 319          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DCXR_HUMAN (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 50/173 (28.90%), Postives = 86/173 (49.71%), Query Frame = -3
Query:  191 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 706
            ++G +D++ NNA +        L+  K   +R   VN       ++  AR ++ +   G I+  +S C++ A      Y  +K  +  L K +A ELG + IRVN V+P  + T M      DP   ++ ++++    G+F + + + NA L+L SD S   +G  L V+GGF
Sbjct:   73 SVGPVDLLVNNAAVA--LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP--LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12
Identity = 52/176 (29.55%), Postives = 91/176 (51.70%), Query Frame = -3
Query:  182 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 706
            +L  +DI+ NNAGI     G  +    +D + ++ VN    F   +     M+ ++ G I+   S        G   Y  SK G++G  K LA E+    I VNCV+P  + + M+ K  ++    E+ M+ +   + G  ++   +A+A  YLAS+E++YV+GQ + V+GG +++
Sbjct:   77 DLEGVDILVNNAGITKD--GLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDK--LNDKQKEAIMAAIPTRRMGTSVE---VASAVAYLASNEAAYVTGQTIHVNGGLAMI 245          

HSP 2 Score: 21.9422 bits (45), Expect = 2.303e-12
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = -2
Query:  735 EDLADKLGQDVCYIHCDISNEDEV 806
            E LA +LG  V     ++SN DEV
Sbjct:   44 ETLAAELGDRVKLFPANLSNRDEV 67          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
HCAB_ECO5E1.529e-1241.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
HCAB_ECO571.529e-1241.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
GRDH_ORYSJ1.529e-1231.67Glucose and ribitol dehydrogenase homolog OS=Oryza... [more]
FABG_BUCAI1.529e-1228.653-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
YLX6_SCHPO1.997e-1229.26Uncharacterized oxidoreductase C922.06 OS=Schizosa... [more]
VER1_ASPPA1.997e-1232.04Versicolorin reductase OS=Aspergillus parasiticus ... [more]
NODG_AZOBR1.997e-1230.68Nodulation protein G OS=Azospirillum brasilense GN... [more]
FABG_ARATH1.997e-1228.743-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
DCXR_HUMAN1.997e-1228.90L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
NODG_RHIS32.303e-1229.55Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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