CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YQC8_SCHPO (Uncharacterized oxidoreductase C1739.08c OS=Schizosaccharomyces pombe GN=SPCC1739.08c PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = -3
Query:  188 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS--PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---GMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 697
            ++ ++  NAG+  R   S+LD+P  + E+++N+NT   +  A +  ++   Q  G ++ TAS    I        AY  SK  +  L K LA E  ++  R+N VSP   AT   G       +P +    +     L+G +L          YLAS+ SS+V+G +L+VDGG++
Sbjct:   98 EIHVVVANAGMPFRR--SVLDSPPHEFEKVMNINTNSVYRVAYYMGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQLCKALAVEWAEFA-RINSVSPGYFATDMPGYEFLKQWEPYVPFKRLGLTPELRGTYL----------YLASNASSFVTGLDLIVDGGYT 259          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DCXR_MESAU (L-xylulose reductase OS=Mesocricetus auratus GN=DCXR PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 50/175 (28.57%), Postives = 84/175 (48.00%), Query Frame = -3
Query:  185 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 706
            ++G +D++ NNA +        L+  K   +   NVN       ++  AR M+ +   G I+  +S  ++ A      Y  +K  +  L K +A ELG + IRVN V+P  + T M      DP   +  + ++    G+F + + + +A L+L S  S+  +G  L VDGGF V
Sbjct:   73 SVGPVDLLVNNAAVA--LLQPFLEVTKEAFDMSFNVNLRAVIQVSQIVARGMIARGAPGAIVNVSSQASQRALANHSVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTSMGRTNWSDPHKAKVMLDRIP--LGKFAEVENVVDAILFLLSHRSNMTTGSTLPVDGGFLV 243          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DCXR_RAT (L-xylulose reductase OS=Rattus norvegicus GN=Dcxr PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.424e-11
Identity = 50/173 (28.90%), Postives = 84/173 (48.55%), Query Frame = -3
Query:  191 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 706
            N+G +D++ NNA +   +    L+  K   +   NVN       ++  AR M+ +   G I+  +S  ++ A      Y  +K  +  L K +A ELG + IRVN V+P  + T M      DP   +  + ++    G+F + + + +  L+L S+ SS  +G  L VDGGF
Sbjct:   73 NVGPVDLLVNNAAVA--TLQPFLEVTKEACDTSFNVNFRAVVQVSQIVARGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTPMGRANWSDPHKAKVMLDRIP--LGKFAEVENVVDTILFLLSNRSSMTTGSALPVDGGF 241          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11
Identity = 38/117 (32.48%), Postives = 66/117 (56.41%), Query Frame = -3
Query:  353 LGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 703
            LG +DI+ NNAGI    FG  LD    + E +I VN +G +   +     M+ ++ G I+  +S   +     + AY+ SK+ +LGL + L  E+ ++ IRV+ ++P  +A+ MS++
Sbjct:   81 LGDIDILINNAGI--SKFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIE 195          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: SOU1_SCHPO (Sorbose reductase sou1 OS=Schizosaccharomyces pombe GN=sou1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11
Identity = 52/172 (30.23%), Postives = 82/172 (47.67%), Query Frame = -3
Query:  191 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP--AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 700
            G+LD+M  NAGI      S+ D  +    +++ +N  G +  A+ A      Q KG ++FTAS    IA       +Y  +K  +  L + LA E   +  RVN VSP  + T +++    +        +    +       D +  A LYLASD SSY +G +++VDGG+
Sbjct:   87 GRLDVMIANAGIAIPHL-SLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWAPFA-RVNSVSPGYIDTDLTLYADENLRKKWKEYTPQARIG----LPDELPGAYLYLASDASSYCTGSDIIVDGGY 252          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHB8_CALJA (Estradiol 17-beta-dehydrogenase 8 (Fragment) OS=Callithrix jacchus GN=HSD17B8 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11
Identity = 44/136 (32.35%), Postives = 72/136 (52.94%), Query Frame = -3
Query:  218 DLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSG 622
            D +++I VN  G FL  + A + +V     G I+  +S   ++  +G   Y  SK G++GL +  A ELG++GIR N V P  +AT M+ K         + M  MG+L       + +A+   +LAS++S Y++G
Sbjct:    1 DWDKVIAVNLKGTFLVTQAAGQALVSSGCSGSIINISSIVGKVGNMGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVMNKITGMIPMGHLG----DPEDVADVVAFLASEDSGYITG 132          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DCXR_TRIRE (L-xylulose reductase OS=Trichoderma reesei GN=lxr1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11
Identity = 55/175 (31.43%), Postives = 83/175 (47.43%), Query Frame = -3
Query:  188 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP--AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 706
            + GK+D    NAG    S   ++D   SD + +I V+  G    AK        Q  G ++ TAS    +A       +Y ++K G + L + LA E   +  RVN +SP  + TG+S         +  SM  MG   G   +  G   A +YL SD SSY +G ++V+DGG++
Sbjct:   97 DFGKIDAFIANAGATANS--GVVDGSASDWDHVIQVDLSGTAYCAKAVGAHFKKQGHGSLVITASMSGHVANYPQEQTSYNVAKAGCIHLARSLANEWRDFA-RVNSISPGYIDTGLSDFIDEKTQELWRSMIPMGR-NGDAKELKG---AYVYLVSDASSYTTGADIVIDGGYT 264          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: ARDH_PICST (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Pichia stipitis GN=ARDH PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11
Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = -3
Query:  191 GKL-DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPA--YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASD-ESSYVSGQNLVVDGGF 700
            GK+ D++ N AG  +         P ++ E ++ VN +G F  ++  AR ++    +G I+   S    I     P   Y +SK G++ LV+ LA E  +Y IRVN +SP  + T ++         ++ +      +K +  +      + LYLAS+  SSY +G NLVVDGG+
Sbjct:  104 GKIADLLINTAGYCENFPAETY--PATNAESIMKVNGLGSFYVSQSFARPLIQNNLRGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLVRSLACEWAKYNIRVNTLSPGYILTPLTRNVISGHTEMKEAWESKIPMK-RMAEPKEFVGSILYLASETASSYTTGHNLVVDGGY 275          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: 3BHD_COMTE (3-beta-hydroxysteroid dehydrogenase OS=Comamonas testosteroni PE=1 SV=5)

HSP 1 Score: 65.855 bits (159), Expect = 8.898e-11
Identity = 56/176 (31.82%), Postives = 81/176 (46.02%), Query Frame = -3
Query:  200 LGKLDIMYNNAGIL---DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YGIRVNCVSPYGLATGM---SMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVD 703
            LG L+++ NNAGIL   D   G +      D  RL+ +NT   F+G +     M  +  G I+  AS  + +       Y+ SK  +  L +  A    +  Y IRVN + P G+ T M   S+  GV   ++        N  G+    + IA   L+LASDESS +SG  L  D
Sbjct:   79 LGTLNVLVNNAGILLPGDMETGRL-----EDFSRLLKINTESVFIGCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKL--NRAGRAYMPERIAQLVLFLASDESSVMSGSELHAD 246          

HSP 2 Score: 21.557 bits (44), Expect = 8.898e-11
Identity = 8/22 (36.36%), Postives = 15/22 (68.18%), Query Frame = -2
Query:  744 GEDLADKLGQDVCYIHCDISNE 809
            G+ LA +LG+   ++  D+S+E
Sbjct:   44 GQQLAAELGERSMFVRHDVSSE 65          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
YQC8_SCHPO4.919e-1130.29Uncharacterized oxidoreductase C1739.08c OS=Schizo... [more]
DCXR_MESAU4.919e-1128.57L-xylulose reductase OS=Mesocricetus auratus GN=DC... [more]
DCXR_RAT6.424e-1128.90L-xylulose reductase OS=Rattus norvegicus GN=Dcxr ... [more]
YOXD_BACSU8.390e-1132.48Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
SOU1_SCHPO8.390e-1130.23Sorbose reductase sou1 OS=Schizosaccharomyces pomb... [more]
DHB8_CALJA8.390e-1132.35Estradiol 17-beta-dehydrogenase 8 (Fragment) OS=Ca... [more]
DCXR_TRIRE8.390e-1131.43L-xylulose reductase OS=Trichoderma reesei GN=lxr1... [more]
ARDH_PICST8.390e-1130.29D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
3BHD_COMTE8.898e-1131.823-beta-hydroxysteroid dehydrogenase OS=Comamonas t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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