CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16
Identity = 61/178 (34.27%), Postives = 95/178 (53.37%), Query Frame = -3
Query:  182 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP-----YGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 700
            G+LDI+ NNAGI+   +G+I +T + D ++ + VN  G FL +K+A   M  Q  G I+  +S    I       Y++SK  +LGL + LA +   YGIRVN V P      GL     +K   +P  +   M+    +K +  K + IA A L+ A DE+ +++G  + +DGG + V
Sbjct:   79 GRLDILVNNAGIVP--YGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMA--RVKASPNPEELLKKMTSRIPMK-RLGKEEEIAFAILFAACDEAGFMTGSIINIDGGSTAV 251          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16
Identity = 61/174 (35.06%), Postives = 91/174 (52.30%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLKGQFLKTDG--IANAALYLASDESSYVSGQNLVVDGG 700
            G++DI+ NNAG+     GS LD    D +  I++N  G +   K     M+ ++ G I+  +S   + +A  G  AY ++K  I+GL K LA E  Q GIRVN + P  + T M  S+    +P   ES +++M          D   +   A +LASDESSY++G   V+DGG
Sbjct:   81 GRIDILVNNAGVC--RLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16
Identity = 59/175 (33.71%), Postives = 92/175 (52.57%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS-----MKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G++DI+ NNAG+     G+ LD  + D +  I++N  G +   K     M+ ++ G I+  +S   + +A  G  AY +SK  I+GL K LA E  Q GIRVN + P  + T M+          DP  + + M++   L+ +      +   A +LASDESSY++G   V+DGG
Sbjct:   81 GRIDILVNNAGVC--RLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLR-RLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16
Identity = 59/175 (33.71%), Postives = 92/175 (52.57%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS-----MKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G++DI+ NNAG+     G+ LD  + D +  I++N  G +   K     M+ ++ G I+  +S   + +A  G  AY +SK  I+GL K LA E  Q GIRVN + P  + T M+          DP  + + M++   L+ +      +   A +LASDESSY++G   V+DGG
Sbjct:   81 GRIDILVNNAGVC--RLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLR-RLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS-----MKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G++DI+ NNAG+     GS LD    D +  I++N  G +   K     M+ ++ G I+  +S   + +A  G  AY ++K  I+GL K LA E  Q GIRVN + P  + T M+          DP  + + M++   L+ +      +   A +LASDESSY++G   V+DGG
Sbjct:   81 GRIDILVNNAGVC--RLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLR-RLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.253e-16
Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 700
            G +DI+ NNAGI     G ++   KS  + +I++N  G FL  + AA++M+ ++KG I+  AS    +   G   Y+ +K G++G  K +A E     I VN V+P  +++ M+ K G D   I   + +   L G++ + + +A    +LA +  SSYV+GQ   +DGG ++
Sbjct:  154 GTVDILVNNAGITRD--GLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDD---INKKILETIPL-GRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGGMTM 320          

HSP 2 Score: 21.557 bits (44), Expect = 5.253e-16
Identity = 8/20 (40.00%), Postives = 14/20 (70.00%), Query Frame = -2
Query:  699 DISNEDEVINLVDTAVSKFG 758
            D+S E++V  ++ TAV  +G
Sbjct:  135 DVSKEEDVEAMIKTAVDAWG 154          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16
Identity = 59/189 (31.22%), Postives = 91/189 (48.15%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKG------------------QFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G+LDI+ NNAGI  +    I + P    E+LI V     F+  KH   +M  QQ G I+  AS    +   G  AY  +K+G++GL K  A E   +GI VN + P          G VD  L+ + +S +   +                   + L    IA+ A++LAS+++  V+GQ +V+DGG++
Sbjct:   79 GRLDILVNNAGI--QHVAPIEEFPTDTFEQLIKVMLTAPFIAMKHVFPIMKKQQFGRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCP----------GYVDTQLVRNQLSDLSKTRNVPYDSVLEQVIFPLVPQKRLLSVKEIADYAVFLASEKAKGVTGQAVVLDGGYT 255          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 6.734e-16
Identity = 56/177 (31.64%), Postives = 89/177 (50.28%), Query Frame = -3
Query:  179 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK----GGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN 697
            +++++ NNAGI   +  +  DT   D +R + +N +G +  A   A++M P     I+  AS    +      AY  SK G++ + K LA      GIRV  V+P  + T M  +    G +D + I   +       G+  + D IA A  +LAS ++SY++G  LVVDGG+  VN
Sbjct:   83 RIEVLVNNAGI-GPTMAATADTALEDFQRALAINLVGAYSVACETAKLMKPG--AAIVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPMVAELERAGKLDVSAIRRRVPL-----GRIARPDEIARAVRFLASAQASYITGSTLVVDGGWMSVN 251          

HSP 2 Score: 22.7126 bits (47), Expect = 6.734e-16
Identity = 10/36 (27.78%), Postives = 18/36 (50.00%), Query Frame = -2
Query:  696 DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 803
            +L   LG+    +  D+S ED+V+ L      +F +
Sbjct:   48 ELGQNLGEPHLGLEVDVSREDDVVALRALLEKRFSR 83          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 53/174 (30.46%), Postives = 98/174 (56.32%), Query Frame = -3
Query:  185 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 706
            ++G +DI+ NNAGI  R+   + +  + D + L++ N    F   +  AR M+P+ +G I+   S  +E+A  G   YT +K  +  L K +A + G++G+++N ++P   AT M+ +   D    +    +     G++ + + +  AA++L+S  SS+V+GQ L+VDGG +V
Sbjct:   85 DMGPIDILINNAGIQRRA--PLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLVADEEFTDWLCKRTP--AGRWGQVEELVGAAVFLSSRASSFVNGQVLMVDGGITV 254          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.926e-16
Identity = 61/175 (34.86%), Postives = 87/175 (49.71%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LDIM NNAG L+    S  + P  D +++I  N  G FLG++ A +  V    KG ++  +S    I       Y  SK GI  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   + + IA  A +LAS E+SYV+G  L  DGG +
Sbjct:   84 GTLDIMINNAG-LENPVPSH-EMPLKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKQKADVESMIPM-----GYIGEPEEIAAVAAWLASKEASYVTGITLFADGGMT 251          

HSP 2 Score: 29.6462 bits (65), Expect = 8.926e-16
Identity = 11/31 (35.48%), Postives = 20/31 (64.52%), Query Frame = -2
Query:  699 KLGQDVCYIHCDISNEDEVINLVDTAVSKFG 791
            K G +   +  D++ E++V N+V TA+ +FG
Sbjct:   54 KAGGEAVVVQGDVTKEEDVKNIVQTAIKEFG 84          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
Y325_THEMA2.977e-1634.27Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
UCPA_ECOLI2.977e-1635.06Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_SALTY3.888e-1633.71Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI3.888e-1633.71Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
UCPA_ECO575.078e-1633.71Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
FABG_CUPLA5.253e-1632.373-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
YXJF_BACSU6.633e-1631.22Uncharacterized oxidoreductase yxjF OS=Bacillus su... [more]
Y4VI_RHISN6.734e-1631.64Uncharacterized short-chain type dehydrogenase/red... [more]
GNO_GLUOX8.663e-1630.46Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
DHG_BACSU8.926e-1634.86Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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