CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 57/181 (31.49%), Postives = 88/181 (48.62%), Query Frame = -3 
Query:  188 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--GNLKGQFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 697
            K+DI+ NNAGI   +   ++   + D + +I+ N    +       R M+  + G I+  AS   +I   G   Y  +K GI+   K LA E+    IRVNC++               P  IE+ M+ +   NLK ++LK+         + +A  AL+LAS  SSY++ Q LVVDGG +
Sbjct:   84 KIDILVNNAGITRDNL--LMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLA---------------PGFIETDMTSVLNDNLKAEWLKSIPLGRAGTPEDVARVALFLASQLSSYMTAQTLVVDGGLT 247
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 53/176 (30.11%), Postives = 92/176 (52.27%), Query Frame = -3 
Query:  194 FLNLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS---MKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 712
            + N G++DI+ NNAGI+      +++    D   ++NVN    F  +K   R M+  ++G I+   S    I   G   Y+ +K G++G  K LA EL   GI VN ++P  + TGM+    +  +   L +  M ++G +K        I+   L+L S++++Y++GQ + V+GG
Sbjct:   75 YKNFGRVDILINNAGIIRDKL--LINMKTQDWNSVLNVNLNSIFYMSKSVIRNMIKNKQGKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMTNNLSQKQLSKYLSKIPMKRLGTIKE-------ISKITLFLISNDANYITGQVIHVNGG 241
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.960e-15
Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = -3 
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LD+M NNAG+ +      L     +  ++I+ N  G FLG++ A +  V    KG ++  +S    I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   K + IA+ A +LAS ++SYV+G  L  DGG +
Sbjct:   84 GSLDVMINNAGVENPVPSHELSL--ENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRADVESMIPM-----GYIGKPEEIASVAAFLASSQASYVTGITLFADGGMT 251

HSP 2 Score: 32.3426 bits (72), Expect = 1.960e-15
Identity = 12/32 (37.50%), Postives = 22/32 (68.75%), Query Frame = -2 
Query:  699 DKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 794
            ++ G     +  D++ E++V+NLV+TAV +FG
Sbjct:   53 EEAGGQAIIVRGDVTKEEDVVNLVETAVKEFG 84
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.552e-15
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = -3 
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   M+ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+     +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   81 GSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

HSP 2 Score: 22.7126 bits (47), Expect = 2.552e-15
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = -2 
Query:  699 GQDVCYIHCDISNEDEVINLVDTAVSKFG 785
            G D   I  ++++ DEV  ++   VS+FG
Sbjct:   53 GVDSFAIQANVADADEVKAMIKEVVSQFG 81
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.552e-15
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = -3 
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   M+ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+     +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   81 GSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

HSP 2 Score: 22.7126 bits (47), Expect = 2.552e-15
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = -2 
Query:  699 GQDVCYIHCDISNEDEVINLVDTAVSKFG 785
            G D   I  ++++ DEV  ++   VS+FG
Sbjct:   53 GVDSFAIQANVADADEVKAMIKEVVSQFG 81
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.552e-15
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = -3 
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   M+ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+     +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   81 GSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

HSP 2 Score: 22.7126 bits (47), Expect = 2.552e-15
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = -2 
Query:  699 GQDVCYIHCDISNEDEVINLVDTAVSKFG 785
            G D   I  ++++ DEV  ++   VS+FG
Sbjct:   53 GVDSFAIQANVADADEVKAMIKEVVSQFG 81
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.552e-15
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = -3 
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   M+ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+     +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   81 GSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

HSP 2 Score: 22.7126 bits (47), Expect = 2.552e-15
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = -2 
Query:  699 GQDVCYIHCDISNEDEVINLVDTAVSKFG 785
            G D   I  ++++ DEV  ++   VS+FG
Sbjct:   53 GVDSFAIQANVADADEVKAMIKEVVSQFG 81
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.552e-15
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = -3 
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   M+ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+     +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   81 GSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

HSP 2 Score: 22.7126 bits (47), Expect = 2.552e-15
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = -2 
Query:  699 GQDVCYIHCDISNEDEVINLVDTAVSKFG 785
            G D   I  ++++ DEV  ++   VS+FG
Sbjct:   53 GVDSFAIQANVADADEVKAMIKEVVSQFG 81
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.552e-15
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = -3 
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G LD++ NNAGI   +   ++   + + + +I+ N  G F   + A   M+ Q+ G I+  +S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+    +   L E  ++Q+     +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   81 GSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

HSP 2 Score: 22.7126 bits (47), Expect = 2.552e-15
Identity = 10/29 (34.48%), Postives = 17/29 (58.62%), Query Frame = -2 
Query:  699 GQDVCYIHCDISNEDEVINLVDTAVSKFG 785
            G D   I  ++++ DEV  ++   VS+FG
Sbjct:   53 GVDSFAIQANVADADEVKAMIKEVVSQFG 81
[Close]
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.557e-15
Identity = 54/174 (31.03%), Postives = 93/174 (53.45%), Query Frame = -3 
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GQFLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 700
            G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D   +E  +  +G +  G++ + + +A    +LA S  SSY++G    + GGF++
Sbjct:  151 GTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED---MEKKI--LGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGFAI 317

HSP 2 Score: 22.7126 bits (47), Expect = 5.557e-15
Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = -2 
Query:  699 DISNEDEVINLVDTAVSKFG 758
            D+S E +V +++ TAV K+G
Sbjct:  132 DVSKEADVDSMMKTAVDKWG 151
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
FABG_CHLPN1.131e-1531.493-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_BUCBP1.131e-1530.113-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
DHG2_BACME1.960e-1532.00Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
FABG_STAAW2.552e-1530.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS2.552e-1530.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR2.552e-1530.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN2.552e-1530.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM2.552e-1530.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC2.552e-1530.773-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG5_BRANA5.557e-1531.033-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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