CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.615e-15
Identity = 60/183 (32.79%), Postives = 94/183 (51.37%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LIESSMSQMGNLKGQ----FLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G  DI+ NNAG+  +    I D P    +R+I VN    F    H  R  +P  K    G I+  ASA   +A     AY  +K+GI+GL K +A E+ + G+ VN + P  + T +  K   D A    + E  +     LKGQ    F+  + +A+ ALYLA D+++ ++G ++ +DGG++
Sbjct:   80 GGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVNLSSSF----HTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWT 256          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.264e-15
Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LD+M NNAG+ +      L     +  ++I+ N  G FLG++ A +  V    KG ++  +S    I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   K + +A  A +LAS ++SYV+G  L  DGG +
Sbjct:   84 GTLDVMINNAGVENPVPSHELSL--DNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKQMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-----GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 251          

HSP 2 Score: 31.187 bits (69), Expect = 7.264e-15
Identity = 11/32 (34.38%), Postives = 21/32 (65.62%), Query Frame = -2
Query:  699 DKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 794
            ++ G     +  D++ E++V+NLV TA+ +FG
Sbjct:   53 EEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFG 84          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15
Identity = 57/170 (33.53%), Postives = 90/170 (52.94%), Query Frame = -3
Query:  191 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 700
            G+LD+M NNAGI   S  S +   + D + ++++N  G F GA  A + M   ++G I+ TAS       L    Y  SK G++GL   L  E+ +  IRV  V+P  + T M+   G+ P ++E  +  +     + LK + IAN  L+LASD +S ++   + VDG +
Sbjct:   84 GRLDVMINNAGITMNSVFSRVS--EEDFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSLSGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTK--GLPPEILEDYLKTLP--MKRMLKPEEIANVYLFLASDLASGITATTISVDGAY 247          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15
Identity = 56/177 (31.64%), Postives = 99/177 (55.93%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPALIESSMSQ--MGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G++D  +NNAGI  +   +   T  ++ ++++++N  G FLG +   ++M  Q  G ++ TAS    I G+G+ + Y  +K+G++GL +  A E G+YGIR+N ++P  + T M   SMK  +DP     +  +    N   ++ +   IA    +L SD++SYV+   + +DGG S
Sbjct:   91 GRIDGFFNNAGIEGKQNPTESFTA-AEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASV-GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK-QLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 264          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15
Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GQFLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 700
            G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D   +E  +  +G +  G++ + + +A    +LA S  +SY++GQ   +DGG ++
Sbjct:  149 GTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED---MEKKI--LGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 315          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15
Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GQFLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 700
            G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D   +E  +  +G +  G++ + + +A    +LA S  +SY++GQ   +DGG ++
Sbjct:  162 GTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED---MEKKI--LGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 328          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15
Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GQFLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 700
            G +D++ NNAGI   +   ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V P  +A+ M+ K G D   +E  +  +G +  G++ + + +A    +LA S  +SY++GQ   +DGG ++
Sbjct:  154 GTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED---MEKKI--LGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 320          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.227e-14
Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LD+M NNAG+ +      L     +  ++I+ N  G FLG++ A +  V    KG ++  +S    I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   K + +A  A +LAS ++SYV+G  L  DGG +
Sbjct:   84 GTLDVMINNAGVENPVPSHELSL--DNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPEQRADVESMIPM-----GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 251          

HSP 2 Score: 31.187 bits (69), Expect = 1.227e-14
Identity = 11/32 (34.38%), Postives = 21/32 (65.62%), Query Frame = -2
Query:  699 DKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 794
            ++ G     +  D++ E++V+NLV TA+ +FG
Sbjct:   53 EEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFG 84          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHG4_BACME (Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.227e-14
Identity = 55/175 (31.43%), Postives = 85/175 (48.57%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LD+M NNAG+ +      L     +  ++I+ N  G FLG++ A +  V    KG ++  +S    I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   K + +A  A +LAS ++SYV+G  L  DGG +
Sbjct:   84 GTLDVMINNAGVENPVPSHELSL--DNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-----GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 251          

HSP 2 Score: 31.187 bits (69), Expect = 1.227e-14
Identity = 11/32 (34.38%), Postives = 21/32 (65.62%), Query Frame = -2
Query:  699 DKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 794
            ++ G     +  D++ E++V+NLV TA+ +FG
Sbjct:   53 EEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFG 84          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.227e-14
Identity = 59/176 (33.52%), Postives = 89/176 (50.57%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACT-EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 700
            GKLD+M NNAG+ +    S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S    +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +ES +       G   + + IA A  +LAS E+SYV+G  L  DGG +
Sbjct:   85 GKLDVMINNAGMENPV--SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----GYIGEPEEIA-AVAWLASSEASYVTGITLFADGGMT 252          

HSP 2 Score: 32.3426 bits (72), Expect = 1.227e-14
Identity = 14/37 (37.84%), Postives = 24/37 (64.86%), Query Frame = -2
Query:  696 EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 806
            E+   K+G +   +  D++ E +VINLV +A+ +FGK
Sbjct:   50 EEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 86          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
BDHA_RHIME5.615e-1532.79D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]
DHG3_BACME7.264e-1531.43Glucose 1-dehydrogenase 3 OS=Bacillus megaterium G... [more]
BAIA1_EUBSP7.333e-1533.53Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
LVR_LEIAQ9.578e-1531.64Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
FABG3_BRANA9.578e-1531.033-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG2_BRANA9.578e-1531.033-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG1_BRANA9.578e-1531.033-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
DHGA_BACME1.227e-1431.43Glucose 1-dehydrogenase A OS=Bacillus megaterium G... [more]
DHG4_BACME1.227e-1431.43Glucose 1-dehydrogenase 4 OS=Bacillus megaterium G... [more]
DHGB_BACME1.227e-1433.52Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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