CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: CBR4_HUMAN (Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14
Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = -3
Query:  182 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 706
            +LG+++ + N AGI     G ++ T   D+   ++ N +G  L  K A R M+ QQ G I+   S        G   Y+ SK G++G  + LA E+ +  IRVN V+P  + T M+        L E  + +   L G+F +T  +A+A ++L   ES Y++G  LVVDGG  ++
Sbjct:   73 HLGRVNFLVNAAGI--NRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQQGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDMTKD------LKEEHLKKNIPL-GRFGETIEVAHAVVFLL--ESPYITGHVLVVDGGLQLI 236          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: SDR1_PICAB (Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 54/169 (31.95%), Postives = 84/169 (49.70%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G L I+ NNAG+ D  + ++  T   + +R+  VN  G FL ++ AA+ +V    G I+  +S+   +      AYT SK  +  + + LA EL    I  NCV+P  +AT M   G  + A+     S      G   K + +A    +LASDE  +V+ Q + V+GG
Sbjct:  104 GPLHIVVNNAGVTDSKYPTLAQTSDEEWDRIFQVNCKGAFLCSREAAKRVVRGGGGRIINISSSLVAMPIPRYGAYTASKAAVEMMTRILAQELRGTQITANCVAPGPVATDMFFAGKSEAAVEAGVKSNPFERLG---KVEDVAPLVAFLASDEGEWVNAQVVRVNGG 269          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = -3
Query:  182 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 697
            KLDI+  NAGI   +    +     D +++I++N    F+  + A + M+  + G I+   S        G   Y  SK G++G+ K LA E+   GI VN V+P  + + M+ K  ++    E+   ++   KG +   + IANA  +LAS +SSY++GQ L V+GG  +V
Sbjct:   76 KLDILVCNAGITKDTLA--IRMKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDMTDK--LNDEQKEAITRKIP--KGTYGMPEDIANAVAFLASKQSSYITGQTLHVNGGMLMV 241          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 54/171 (31.58%), Postives = 90/171 (52.63%), Query Frame = -3
Query:  194 LDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---GQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 694
            +DI+ NNAGI  D+ F   L     D E ++ VN  G FL  +++ R M+ Q+ G I+  +S       +G   Y+ +K G++G  K LA EL    + VN V+P  + T M+       A++   + Q    +   G+F   + +AN  L+L S+ +SY++G+ + V+GG
Sbjct:   86 IDILVNNAGITRDKLF---LRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT-------AVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YF3H_SCHPO (Uncharacterized oxidoreductase C22A12.17c OS=Schizosaccharomyces pombe GN=SPAC22A12.17c PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13
Identity = 60/173 (34.68%), Postives = 85/173 (49.13%), Query Frame = -3
Query:  182 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP--AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 694
            +DI+  N GI      S +D    +    INVN +G F  A +A  +   Q  G ++ TAS    +  +     AY  SK G++ L+K LA E  ++  RVNCVSP G  T     G         +  +   L  +      IA+A LYLASD +SY SG NL+VDGG++ +
Sbjct:   99 IDIVVPNNGICTGK--SAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRKFA-RVNCVSP-GYTTSDMTGGKFHKEWEPYTPFERNGLAKE------IASAYLYLASDAASYASGTNLIVDGGYTSI 261          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = -3
Query:  182 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 700
            G++DI+ NNAGI   +   ++     +   +I  N    F  +K   R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+P  + T M+     D      +    G L G       IANA  +LASDE++Y++G+ L V+GG  +V
Sbjct:   78 GEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGG----AQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = -3
Query:  182 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 700
            G++DI+ NNAGI   +   ++     +   +I  N    F  +K   R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+P  + T M+     D      +    G L G       IANA  +LASDE++Y++G+ L V+GG  +V
Sbjct:   78 GEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGG----AQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.297e-13
Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G +D++ NNAGI   +   ++   + + + +I+ N  G F   +     M+ Q+ G I+   S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+     D   ++  M +   LK +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   79 GSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDD---LKDQMLEQIPLK-RFGEDTDIANTVAFLASDKAKYITGQTIHVNGG 241          

HSP 2 Score: 21.1718 bits (43), Expect = 1.297e-13
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = -2
Query:  699 IHCDISNEDEVINLVDTAVSKFG 767
            I  +++  DEV  ++   VS+FG
Sbjct:   57 IQANVAKGDEVKEMIKEVVSQFG 79          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.297e-13
Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G +D++ NNAGI   +   ++   + + + +I+ N  G F   +     M+ Q+ G I+   S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+     D   ++  M +   LK +F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   79 GSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDD---LKDQMLEQIPLK-RFGEDTDIANTVAFLASDKAKYITGQTIHVNGG 241          

HSP 2 Score: 21.1718 bits (43), Expect = 1.297e-13
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = -2
Query:  699 IHCDISNEDEVINLVDTAVSKFG 767
            I  +++  DEV  ++   VS+FG
Sbjct:   57 IQANVAKGDEVKEMIKEVVSQFG 79          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = -3
Query:  182 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 700
            G++DI+ NNAGI   +   ++     +   +I  N    F  +K   R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+P  + T M+     D      +    G L G       IA+A  +LASDE+SY++G+ L V+GG  +V
Sbjct:   78 GEVDILVNNAGITRDNL--LMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGG----AQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CBR4_HUMAN4.753e-1432.57Carbonyl reductase family member 4 OS=Homo sapiens... [more]
SDR1_PICAB6.208e-1431.95Short-chain type dehydrogenase/reductase OS=Picea ... [more]
FABG_RICBR6.208e-1431.983-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_AQUAE8.108e-1431.583-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
YF3H_SCHPO1.059e-1334.68Uncharacterized oxidoreductase C22A12.17c OS=Schiz... [more]
FABG_SHIFL1.059e-1331.213-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI1.059e-1331.213-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG_STAES1.297e-1330.183-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ1.297e-1330.183-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_SALTY1.383e-1331.213-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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