CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = -3
Query:  182 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 700
            G++DI+ NNAGI   +   ++     +   +I  N    F  +K   R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+P  + T M+     D      +    G L G       IA+A  +LASDE+SY++G+ L V+GG  +V
Sbjct:   78 GEVDILVNNAGITRDNL--LMRMKDDEWNDIIETNLSSVFRLSKAVMRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGG----AQEIASAVAFLASDEASYITGETLHVNGGMYMV 244          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: CBR2_PIG (Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = -3
Query:  191 LGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 703
            +G +D++ NNA +        LDT K   +R  NVN    F  ++  AR M+ +   G I+  +S  + +   G  AY+ +K  +  L K +A ELG + IRVN V+P  + T M      DP L      +    K  F + + + N+ L+L SD S+  SG ++ VD G+
Sbjct:   74 VGPVDLLVNNAAVA--LMQPFLDTTKEVFDRSFNVNLRSVFQVSQIVARSMIERGVPGSIVNVSSMVSHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVLTAMGRSVTSDPELARKLKERHPMRK--FAEVEDVVNSILFLLSDRSASTSGSSIFVDAGY 241          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAG--LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL----ATGMSMKGGVDPALIES-SMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 700
            G  +I+ NNAGI        LD   +D +R++ VN      G  + ++V +P  +    G I   +S   +  G   G P Y+ +K G+LGL K +A E G   IRVNCV+P GL     TG  +   +   +++   +S++G+ +        +AN  L+LASD S+YV+G  + V+GG  +
Sbjct:   84 GVANILINNAGITQPV--KTLDISDADWQRIVAVN----MTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTP-GLIQTDITGDKLSAEMRADIVKGIPLSRLGDAR-------DVANIYLFLASDLSAYVTGAVIDVNGGMLI 252          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13
Identity = 53/177 (29.94%), Postives = 90/177 (50.85%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG----MSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDE-SSYVSGQNLVVDGGFSV 700
            G +D++ NNA ++  S  SI + P  + ER+I VN  G ++ +++ A  M+ +  G I+  AS     +   +  Y+ SK G++ L   LA  L +Y IRV  +SP  + T      S++   D   I+      G +         IA+  ++LA DE + +++G N +VDGG +V
Sbjct:   80 GGVDVLVNNAAVM--SVKSIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSISPGWIETSEWKKKSLRKKPDLRPIDHEQHPAGRVGNPL----DIAHLCVFLADDEKAGFITGTNFIVDGGMTV 250          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: DHB8_CANFA (Estradiol 17-beta-dehydrogenase 8 OS=Canis familiaris GN=HSD17B8 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13
Identity = 54/168 (32.14%), Postives = 92/168 (54.76%), Query Frame = -3
Query:  194 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES--SMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 688
            ++ + AG+    F  +L   + D +R+I VN  G FL  + AA+ +V    +G I+  +S   ++  +G   Y  SK G++GL +  A ELG++GIR N V P  + T M+ K  V   +++    M  MG+L       + +A+A  +LAS++S Y++G ++ V GG
Sbjct:   97 VVVSCAGLTRDEF--LLRMSEDDWDRVIAVNLKGIFLVTQAAAQALVSSGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFITTPMTQK--VPQKVLDKVIGMIPMGHLG----DPEDVADAVTFLASEDSGYITGASVEVTGG 256          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = -3
Query:  191 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGC-ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 700
            G +DI+ NNAG++ R     L+  + D + ++N+N    F  ++ AA+  + Q  G  I+  AS  +   G+  P+YT SK G++G+ + +A E  ++ I VN ++P  +AT  + +   D       + ++    G++     +    ++LAS  S YV+G  + VDGG+
Sbjct:   84 GHIDILVNNAGLIRRE--DALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIP--AGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGW 250          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13
Identity = 51/172 (29.65%), Postives = 92/172 (53.49%), Query Frame = -3
Query:  182 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 697
            KLDI+  NAGI   +    +     D +++I++N    F+  + A + M+  + G I+  +S        G   Y  SK G++G+ K L+ E+   GI VN V+P  + + M+ K  ++    E+ + ++    G +   + +ANA  +LASD++SY++GQ + V+GG  +V
Sbjct:   76 KLDILVCNAGITSDTLA--IRMKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK--LNEKQREAIVQKIP--LGTYGMPEDVANAVAFLASDQASYITGQTIHVNGGMLMV 241          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13
Identity = 54/170 (31.76%), Postives = 88/170 (51.76%), Query Frame = -3
Query:  191 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 700
            G+LD+M NNAGI   +  S +   + + + ++++N  G F GA  A + M   +KG I+ TAS       L    Y  SK  ++GL   L  E+ +  IRV  V+P  + T M+   G  P ++E  +  +     + L+ + IAN  L+LASD +S ++   + VDG +
Sbjct:   84 GRLDVMINNAGITSNNVFSRVS--EEEFKHIMDINVTGVFNGAWCAYQCMKDAKKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMT--NGNPPEIMEGYLKALP--MKRMLEPEEIANVYLFLASDLASGITATTVSVDGAY 247          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YKVO_BACSU (Uncharacterized oxidoreductase ykvO OS=Bacillus subtilis GN=ykvO PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = -3
Query:  182 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 700
            GKLDI++ NAGI   +F  + +  +  ++R  ++N  G     + A  +  P + G I+ T S    I       Y  SK  +  LV+    +L    IRVN VSP G+ T     + G     ++E+S + +    G+    + +ANA  +LASDESSY++G  L VDGG + V
Sbjct:   79 GKLDILFANAGI--GNFLPLGEITEEQVDRTFDINVKGTIFTVQKALSLF-PDKVGSIIVTGSTAGSIGNPAFSVYGASKAALRALVRNWILDLKGTEIRVNVVSPGGILTPAYDELFGDALEEVLENSRNTVP--AGKVGTPEEVANAVSFLASDESSYLTGVELFVDGGLAQV 248          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: NODG_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 53/178 (29.78%), Postives = 87/178 (48.88%), Query Frame = -3
Query:  182 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK---GGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 706
            +L  +DI+ NNAGI     G  L     D + ++ VN    F   +   + M+ ++ G I+   S    I   G   Y  SK G++G  K LA E+    I VNCV+P  + + M+ K      +  ++   + +MG           +A+A  YLASD ++YV+GQ + V+GG +++
Sbjct:   77 DLEGVDILVNNAGITKD--GLFLHMADPDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGT-------GTEVASAVAYLASDHAAYVTGQTIHVNGGMAMI 245          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
FABG_SALTI1.383e-1331.213-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
CBR2_PIG1.383e-1331.40Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2... [more]
Y4MP_RHISN1.806e-1332.24Uncharacterized short-chain type dehydrogenase/red... [more]
Y019_THEMA1.806e-1329.94Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
DHB8_CANFA1.806e-1332.14Estradiol 17-beta-dehydrogenase 8 OS=Canis familia... [more]
KDUD_ECOLI2.359e-1328.652-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
FABG_RICFE2.359e-1329.653-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
BAIA2_EUBSP2.359e-1331.76Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
YKVO_BACSU3.081e-1332.57Uncharacterized oxidoreductase ykvO OS=Bacillus su... [more]
NODG_RHIME3.081e-1329.78Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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