CN188628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CN188628 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 170 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 397 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 145.976 bits (367), Expect = 1.869e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 398 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 625 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2 Query: 5 TIDNVKAKIQDKAGIPPDQQRLIFAGKQLEDGRTLAPYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDK GIPPDQQRLIFAGKQLEDGRTL+ YNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 The following BLAST results are available for this feature:
BLAST of CN188628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188628 ID=CN188628; Name=CN188628; organism=Citrus sinensis; type=EST; length=702bpback to top |