CN181564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 2.564e-32 Identity = 66/128 (51.56%), Postives = 97/128 (75.78%), Query Frame = -1 Query: 183 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 566 +RKNG++VIKG PCK+V++STSKTGKHGHAK ++ IDIF GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + +I + GK+ +VSV A+G+E + ++K Sbjct: 30 LRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.836e-31 Identity = 72/126 (57.14%), Postives = 93/126 (73.81%), Query Frame = -1 Query: 195 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDENLLSQIKDGFESGK-DLVVSVQCAMGEEQI 566 +RKN +++IKGRPCK+VE+STSKTGKHGHAK H+V IDIF KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L QI+D +E + ++V V A+GEE I Sbjct: 29 LRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAI 152
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.466e-29 Identity = 70/130 (53.85%), Postives = 93/130 (71.54%), Query Frame = -1 Query: 183 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDENLLSQIKDGFESGK-DLVVSVQCAMGEEQINALK 566 +RKN +++I+GRPCK+VE+STSKTGKHGHAK H+V IDIF KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + +L + I++ E + ++V V A GEE I K Sbjct: 29 LRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMP-EGDLGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.113e-14 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = -1 Query: 195 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQI 566 I+ +IVI G PCKVVEV SKTGKHG AK +VGI F+G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + S++ +G E V V MG +I Sbjct: 11 IKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEGVE------VEVWEVMGRHKI 127
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULTO (Translation initiation factor 5A OS=Sulfolobus tokodaii GN=eif5a PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y+VI G PC+VVE+S +KTGKHG AK ++V I +F G+K + P +VP + + Q++ D + EN T D+ PTD +++ +I+ G E Sbjct: 11 LKVGNYVVIDGEPCRVVEISKAKTGKHGSAKANIVAIGLFTGQKRTLMAPVDQQVEVPIIEKHIGQILADKGDTITIMDMENYET-FDIEKPTDADIVDKIRPGAE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.728e-12 Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = -1 Query: 183 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 566 +++ YIVI G PC+VVEV+ +KTGKHG AK +++ + IF G K + P +VP + + Q+I D + E T ++ +PT+E++ S+IK KD V MG ++I +K Sbjct: 11 MKEGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12 Identity = 37/106 (34.91%), Postives = 61/106 (57.55%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ +I+I G PCK+VE+S +KTGKHG AK H+V I + +G K + P +VP + + Q++ I+ D V L+ ++ LP +E L S+++ G E Sbjct: 11 LKPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDS-VQLMDMETYDTFEVPLPEEEELKSRLEPGVE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_SULAC (Translation initiation factor 5A OS=Sulfolobus acidocaldarius GN=eif5a PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12 Identity = 36/106 (33.96%), Postives = 61/106 (57.55%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ Y++I G PC+VVE++ +KTGKHG AK ++V I +F G+K + P +VP + + Q++ D + E+ T DL PT+ ++S+I+ G E Sbjct: 11 LKVGSYVMIDGEPCRVVEITKAKTGKHGSAKANVVAIGLFTGQKRSLMAPVDQQVEVPIIEKHVGQILADKGDNLTIMDLESYET-FDLEKPTENEIVSKIRPGAE 115
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_METKA (Translation initiation factor 5A OS=Methanopyrus kandleri GN=eif5a PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = -1 Query: 180 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKD 566 ++K YI+I PCK+VE +TS GKHG AK +V + +F+GKK P DVP + R Q++ D V L+ +++ P DE L SQ++ G +V A G+ +I +K+ Sbjct: 13 LKKGKYIMIDDEPCKIVEYTTSSPGKHGSAKARIVAVGLFDGKKRTLTKPVDAKVDVPVIERKTAQVVSDMGD-TVQLMDMETYETFEVQKPEDEELASQLEPG------TMVEYMEAAGKRKIVGIKE 134
BLAST of CN181564 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.567e-12 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = -1 Query: 249 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHLVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 566 ++ +I+I G PC++VE+S +KTGKHG AK H+V I +F G K + P +VP + + Q+I D + E T ++ P+DE L ++K G E Sbjct: 11 LKPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPGVE 115 The following BLAST results are available for this feature:
BLAST of CN181564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181564 ID=CN181564; Name=CN181564; organism=Citrus sinensis; type=EST; length=566bpback to top |