CN181555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB2_KLULA (RuvB-like helicase 2 OS=Kluyveromyces lactis GN=RVB2 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.009e-49 Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = 2 Query: 80 LTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 L + I AHSHI GLGLD +L+ + S+GMVGQL AR+AAGVIL+M++ G IAGRAVL+AG P TGKTA+AMG+++SLG + PF I+ SEIFSLE+SKTEAL QAFRK+IG++IK QIDR T +MET+Y+LG KMIE L KEKV +GDVI+IDK SG Sbjct: 12 LKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITG--GHKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISIDKASG 195
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB2_YARLI (RuvB-like helicase 2 OS=Yarrowia lipolytica GN=RVB2 PE=3 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 2.485e-48 Identity = 103/198 (52.02%), Postives = 140/198 (70.71%), Query Frame = 2 Query: 47 MAELKLSESRDLTRIERIGAHSHIRGLGLD-SSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 M+ +++++D+ + + AHSHI GLGL+ +SL ++ ++GMVGQ+ AR+AA V+LQMIK+GKIAGR+VL+AG P TGKTAIAMG+++SLG + PF ++ SEI+SLE+SKTEAL QAFRK+IGVRIK QIDR + +MET+YDLG KMI++L EKV +GDVI+IDK SG Sbjct: 1 MSIATVAQAKDVRGLNLVAAHSHITGLGLEPNSLTPKENAQGMVGQVKARRAAAVVLQMIKDGKIAGRSVLLAGPPSTGKTAIAMGISQSLGSDVPFTSLAGSEIYSLELSKTEALNQAFRKSIGVRIKETTDIIEGEVVEIQIDRSLSG--GHKQGKLTIKTTDMETIYDLGHKMIDSLSNEKVTAGDVISIDKASG 196
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB2_ASHGO (RuvB-like helicase 2 OS=Ashbya gossypii GN=RVB2 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.536e-48 Identity = 103/196 (52.55%), Postives = 134/196 (68.37%), Query Frame = 2 Query: 56 LKLSESRDLT--RIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRIKXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMETVYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 ++ E+ D++ + I HSHI GLGLD +L+ + S+GMVGQL AR+AAGVIL+M++ G IAGRAVL+AG P TGKTA+AMG+++SLG + PF ++ SEIFSLE+SKTEAL QAFRK+IGV+IK QIDR T +MET+Y+LG KMI+ L KEKV +GDVI+IDK G Sbjct: 3 IQTQEAHDMSLKSLSLIATHSHIVGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGLSQSLGADVPFTAMAGSEIFSLELSKTEALTQAFRKSIGVKIKEDTELIEGEVVEIQIDRSITG--GHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKACG 196
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_RAT (RuvB-like 1 OS=Rattus norvegicus GN=Ruvbl1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33 Identity = 81/198 (40.91%), Postives = 118/198 (59.60%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +K+ E + T+ +RI +HSH++GLGLD S A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V++GDVI I+ SG Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSG 198
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_MOUSE (RuvB-like 1 OS=Mus musculus GN=Ruvbl1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33 Identity = 81/198 (40.91%), Postives = 118/198 (59.60%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +K+ E + T+ +RI +HSH++GLGLD S A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V++GDVI I+ SG Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSG 198
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_HUMAN (RuvB-like 1 OS=Homo sapiens GN=RUVBL1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33 Identity = 81/198 (40.91%), Postives = 118/198 (59.60%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +K+ E + T+ +RI +HSH++GLGLD S A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V++GDVI I+ SG Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSG 198
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_DROPS (RuvB-like helicase 1 OS=Drosophila pseudoobscura pseudoobscura GN=pont PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.121e-32 Identity = 81/198 (40.91%), Postives = 115/198 (58.08%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +K+ E + R +RI AHSH++GLGLD + A + G+VGQ AR+AAG+++ +IK K+AGRA+L+AG PGTGKTAIA+ +A+ LG + PF + SE+FS E+ KTE LM+ FR++IG+RI K + + P T L + +AL KEKV+ GDVI I+ SG Sbjct: 1 MKIEEVKSTVRTQRIAAHSHVKGLGLDEAGSALQSAAGLVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEANSG 198
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_XENLA (RuvB-like 1 OS=Xenopus laevis GN=ruvbl1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.911e-32 Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +K+ E + T+ +RI HSH++GLGLD + A+ + G+VGQ AR+A GVI+++IK K+AGRAVL+AG PGTGKTA+A+ +A+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V+ GDVI I+ SG Sbjct: 1 MKIEEVKSTTKTQRIATHSHVKGLGLDENGIAKQAAAGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGNKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIRETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIYESLQKERVEVGDVIYIEANSG 198
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_DANRE (RuvB-like 1 OS=Danio rerio GN=ruvbl1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.911e-32 Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +K+ E + T+ +RI +HSH++GLGLD + A+ + G+VGQ AR+A G+I ++I+ K+AGRA+L+AG PGTGKTA+A+ MA+ LG + PF + SE++S E+ KTE LM+ FR+AIG+RI K + + P T L + E+L KE+V+ GDVI I+ SG Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDEAGNAKQSASGLVGQESAREACGIITELIRSKKMAGRAILLAGPPGTGKTALALAMAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIYESLQKERVEVGDVIYIEANSG 198
BLAST of CN181555 vs. ExPASy Swiss-Prot
Match: RUVB1_DROME (RuvB-like helicase 1 OS=Drosophila melanogaster GN=pont PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.562e-32 Identity = 81/198 (40.91%), Postives = 114/198 (57.58%), Query Frame = 2 Query: 56 LKLSESRDLTRIERIGAHSHIRGLGLDSSLEARDVSEGMVGQLPARKAAGVILQMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQAFRKAIGVRI---KXXXXXXXXXXXXXQIDRPATSXXXXXXXXXXXXXXEMET-VYDLGGKMIEALGKEKVQSGDVIAIDKVSG 637 +K+ E + R +RI AHSH++GLGLD A + G+VGQ AR+AAG+++ +IK K+AGRA+L+AG PGTGKTAIA+ +A+ LG + PF + SE+FS E+ KTE LM+ FR++IG+RI K + + P T L + +AL KEKV+ GDVI I+ SG Sbjct: 1 MKIEEVKSTVRTQRIAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEANSG 198 The following BLAST results are available for this feature:
BLAST of CN181555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181555 ID=CN181555; Name=CN181555; organism=Citrus sinensis; type=EST; length=637bpback to top |