CN188612

Overview
NameCN188612
Unique NameCN188612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTT1_HUMAN (Glutathione S-transferase theta-1 OS=Homo sapiens GN=GSTT1 PE=1 SV=4)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 55/198 (27.78%), Postives = 98/198 (49.49%), Query Frame = 2
Query:   89 MVVKVYGPAYASPKRVILCLVEK-EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNY-NPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWW 673
            M +++Y    + P R +    +K +I FE   VDLIKG+  S  + ++ P  ++P ++DGDF L ES AI+ Y   KY+        + ++ R  V+++L  +        +  L  +++F    G PV  + +  +  +L  TL + E++  ++K +L G   SLADL  I     L+ P+G    + + +   A W
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPLKKVPALKDGDFTLTESVAILLYLTRKYKVP-DYWYPQDLQARARVDEYLAWQHTTLRRSCLRALWHKVMFPVFLGEPVSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVAIT---ELMHPVGAGCQVFEGRPKLATW 194          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GST1D_ANOGA (Glutathione S-transferase 1, isoform D OS=Anopheles gambiae GN=GstD1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  104 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 589
            Y P  A  + V +      +E      DL+KGE   PE+LKL P   +P + D  F L+ESRAI  Y AEKY  +  +L  K  ++R +V Q L  +         +     +F+ +   P +EK +K++   L   L+  E       Y AG+  ++ADLS
Sbjct:    5 YLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDNGFALWESRAIQIYLAEKY-GKDDKLYPKDPQKRAVVNQRLYFDMGTLYQRFADYHYPQIFAKQPANPENEKKMKDAVGFLNTFLEGQE-------YAAGNDLTIADLS 158          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GST1_SCHPO (Glutathione S-transferase 1 OS=Schizosaccharomyces pombe GN=gst1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 52/179 (29.05%), Postives = 91/179 (50.84%), Query Frame = 2
Query:   86 TMVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD---GDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL 613
            T+    +GP   +P +V+  L E ++ +ET  V+  K EQ+SPE+L L P G +P + D    D+ ++ES AI+ Y A+KY ++    L +   E   V Q+L  +A         +  Q  + S + + +    +     ++ + L V E+ L    YL  + F++ADLS I + ++L
Sbjct:    5 TLWSHAHGP---NPWKVVQALKELDLTYETRYVNFSKNEQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQG----IIWGQAGWFSVYHQELVISAITRYRNEIKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFL 176          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTT2_MOUSE (Glutathione S-transferase theta-2 OS=Mus musculus GN=Gstt2 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 49/197 (24.87%), Postives = 96/197 (48.73%), Query Frame = 2
Query:   89 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMG-RQHMIRDRKHVSAW 670
            M +++Y    + P R +    +K  I F+T  VD++KG+  S ++ ++    ++PV++DG F+L ES AI+ Y + KY+          ++ R  V ++L   A N       L    +     G  V ++ V+ + +++   L   E++  + + +L G   +LADL  +     L+ P+G   ++   R  ++AW
Sbjct:    1 MGLELYLDLLSQPSRAVYIFAKKNGIPFQTRTVDILKGQHMSEQFSQVNCLNKVPVLKDGSFVLTESTAILIYLSSKYQ-VADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPQEKVERNRDRMVLVLQQLEDKFLRDRAFLVGQQVTLADLMSL---EELMQPVGLGYNLFEGRPQLTAW 193          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTT2_HUMAN (Glutathione S-transferase theta-2 OS=Homo sapiens GN=GSTT2 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 56/198 (28.28%), Postives = 98/198 (49.49%), Query Frame = 2
Query:   89 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAI-YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEER-LSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQH-MIRDRKHVSAW 670
            M ++++    + P R +    +K  I  E   VDL+KG+ +S E+L++   G+LP ++DGDFIL ES AI+ Y + KY++         ++ R  V ++L   A          L +Q+L     G  V E+ V+ +   + + L   E++ L    +LAG   +LADL  +     L+ P+   + +   R  ++AW
Sbjct:    1 MGLELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTP-DHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVL-GPLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMAL---EELMQPVALGYELFEGRPRLAAW 193          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTT1_BOVIN (Glutathione S-transferase theta-1 OS=Bos taurus GN=GSTT1 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 58/201 (28.86%), Postives = 99/201 (49.25%), Query Frame = 2
Query:   89 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVE----AHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMGRQ-HMIRDRKHVSAW 670
            M +++Y    + P R I    +K  I FE   VDL KG+  S  + ++ P  ++P+++DGDFIL ES AI+ Y A KY+        + ++    V+++L  +      N   A++   +  +F    G PV  +++  +  +L   L V E +  + K +L G   SLADL  I     L+ P+G    + + R  ++AW
Sbjct:    1 MGLELYLDLLSQPCRAIYIFAKKNRIPFELRTVDLRKGQHLSDAFAQVNPLQKVPILKDGDFILTESVAILLYLARKYKVP-DHWYPQDLQACARVDEYLAWQHTALRRNCLRALWHKVMLPVF---LGEPVSPEMLATTLAELDMALQVLEGKFLQDKAFLTGSHISLADLVAIT---ELMHPVGAGCQVFKGRPKLAAW 194          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTZ2_DIACA (Glutathione S-transferase 2 (Fragment) OS=Dianthus caryophyllus GN=GST2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 2
Query:  131 RVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKL 481
            RV + L  K ++FE   VDL+KGE  +PE+LKL P G +P +  GD ++ +S AI+ Y  EK+      LL + +++R L  Q   + A N  P    L +      K G   DEKL
Sbjct:   22 RVRIALHLKGLDFEYKAVDLLKGEHLTPEFLKLNPLGYVPALVHGDIVIADSLAIIMYLEEKFPE--NPLLPRDLQKRALNYQAANIVASNIQP-FQNLAVLNYIEEKLGS--DEKL 133          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTA_RHILE (Protein gstA OS=Rhizobium leguminosarum GN=gstA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 44/145 (30.34%), Postives = 74/145 (51.03%), Query Frame = 2
Query:  161 IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHN--YNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 589
            + +E V VDL  G  ++P++LKL PFG++PV+ D   ++ +S AI+ Y A KY    T+ L +       +++WL V A    Y P    L    +F + F    DE + +       + L + E  L   ++L GD  ++AD++
Sbjct:   24 VPYELVEVDLAAGAHKAPDFLKLNPFGQVPVLDDNGTVIADSSAILVYLARKYGR--TDWLPEEAVAAARIQKWLSVAAGEIAYGPCAARLV--TVFGADF--RTDEVIARAH-----RILALVEAELGARRFLLGDNATIADIA 157          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GSTA_PLEPL (Glutathione S-transferase A OS=Pleuronectes platessa PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 54/194 (27.84%), Postives = 95/194 (48.97%), Query Frame = 2
Query:  131 RVILCLVEKEIE-FETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPV-DEKLVKESDEKLGKTLDVYEERLSKS--KYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDR-KHVSAWWDDISNRPS 697
            RV++ L EK ++ + +  +   KGE +S E + + P G+LP  + G  +L ES A   Y   +++SQG +L+     E+ ++ Q              ++   + +S K       +  VK + E L   L ++EE L K+   ++AG  FSLAD+S  P   YL     R  +  +R   ++A+++ +  RPS
Sbjct:   18 RVMIVLEEKNLQAYNSKLLSFEKGEHKSAEVMSMNPRGQLPSFKHGSKVLNESYAACMYLESQFKSQGNKLIPDCPAEQAMMYQ----RMFEGLTLAQKMADVIYYSWKVPEAERHDSAVKRNKENLSTELKLWEEYLQKTSGSFVAGKSFSLADVSVFPGVAYLF----RFGLTEERYPQLTAYYNSLKERPS 203          
BLAST of CN188612 vs. ExPASy Swiss-Prot
Match: GST2_SCHPO (Glutathione S-transferase 2 OS=Schizosaccharomyces pombe GN=gst2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 2
Query:  122 SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD---GDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMG 628
            +P +V+L L E  + +E +  D  KGEQ+  E+L L P G +P + D    D+ ++ES AI+ Y A+KY +     L     E   + Q+L  +A        +      F+     PV   + +  +E + + L V E+ L    YL  + +++ADLS IP+ + L G  G
Sbjct:   14 NPWKVVLALKELNLSYEQIFYDFQKGEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAILIYLADKYDTDRKISLSFDDPEYYKLIQYLFFQASGQGVIWGQAG---WFNFFHHEPVVSAVTRYRNE-IKRVLGVLEDILKDRDYLVANKYTIADLSFIPWNYNLGGLFG 181          
The following BLAST results are available for this feature:
BLAST of CN188612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
GSTT1_HUMAN1.688e-1127.78Glutathione S-transferase theta-1 OS=Homo sapiens ... [more]
GST1D_ANOGA1.688e-1131.48Glutathione S-transferase 1, isoform D OS=Anophele... [more]
GST1_SCHPO2.204e-1129.05Glutathione S-transferase 1 OS=Schizosaccharomyces... [more]
GSTT2_MOUSE4.910e-1124.87Glutathione S-transferase theta-2 OS=Mus musculus ... [more]
GSTT2_HUMAN4.910e-1128.28Glutathione S-transferase theta-2 OS=Homo sapiens ... [more]
GSTT1_BOVIN4.910e-1128.86Glutathione S-transferase theta-1 OS=Bos taurus GN... [more]
GSTZ2_DIACA8.376e-1136.75Glutathione S-transferase 2 (Fragment) OS=Dianthus... [more]
GSTA_RHILE8.376e-1130.34Protein gstA OS=Rhizobium leguminosarum GN=gstA PE... [more]
GSTA_PLEPL8.376e-1127.84Glutathione S-transferase A OS=Pleuronectes plates... [more]
GST2_SCHPO8.376e-1129.65Glutathione S-transferase 2 OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188612 ID=CN188612; Name=CN188612; organism=Citrus sinensis; type=EST; length=698bp
CGTAAAGGGGTGAGCAAACTGCCCGTAGATTACGATCACCCCCTCACTTG
CTGCTTTTTATCGACAGAAAAAGTTAACACCAGCAACGATGGTGGTCAAG
GTGTACGGTCCGGCTTATGCTTCTCCCAAACGAGTGATTTTGTGCTTGGT
TGAGAAGGAAATCGAATTTGAAACTGTCCCCGTTGATCTCATCAAAGGAG
AGCAGAGAAGTCCTGAGTACCTCAAATTACAGCCTTTTGGAGAGCTTCCT
GTCATTCAAGATGGAGATTTTATTTTATACGAGTCGCGAGCTATCATGAG
GTACTACGCTGAAAAGTACAGGTCTCAAGGAACCGAACTTCTGGGTAAAA
CAATTGAAGAAAGAGGCCTGGTGGAACAGTGGCTAGAAGTAGAGGCACAC
AACTACAACCCAGCAATTTACGAGCTGACCATCCAACTTTTATTTTCCTC
CAAGTTTGGACGTCCCGTTGATGAAAAATTGGTGAAGGAGAGTGACGAAA
AGCTTGGAAAAACGCTCGACGTTTACGAGGAGAGGCTGTCGAAGAGCAAG
TATTTGGCTGGTGATTTCTTCAGCCTGGCTGATCTGAGTCACATTCCATT
TACCCACTACTTGGTTGGGCCGATGGGGAGACAGCATATGATTAGAGACA
GGAAGCATGTGAGTGCCTGGTGGGATGATATTAGCAACAGGCCGTCCT
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