CN181535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_MOUSE (40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.115e-22 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 123 IDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEA---KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 ID+ P++QWY HY + +GR P EE K+S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 104 IDSTPYRQWYESHYALPLGRKKGAKL------------TPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_MACFA (40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.115e-22 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 123 IDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEA---KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 ID+ P++QWY HY + +GR P EE K+S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 104 IDSTPYRQWYESHYALPLGRKKGAKL------------TPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_HUMAN (40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.115e-22 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 123 IDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEA---KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 ID+ P++QWY HY + +GR P EE K+S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 104 IDSTPYRQWYESHYALPLGRKKGAKL------------TPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_BOVIN (40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.115e-22 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 123 IDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEA---KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 ID+ P++QWY HY + +GR P EE K+S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 104 IDSTPYRQWYESHYALPLGRKKGAKL------------TPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_APIME (40S ribosomal protein S8 OS=Apis mellifera GN=RpS8 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 9.167e-22 Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 ++IDA PF+QWY HY + +GR E EE K+S K + RQ+ ++P +EEQF +GR+LACI+SRPGQCGR DGYILEGKELEFYM++++ Sbjct: 102 VTIDATPFRQWYEGHYVLPLGRKRGAKLT-----EAEE----EVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQCGREDGYILEGKELEFYMRRIK 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_SPOFR (40S ribosomal protein S8 OS=Spodoptera frugiperda GN=RpS8 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.197e-21 Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 123 IDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 +DA PF+QWY HY + +GR E E+ A K+S +K RQ+ ++ +EEQF +GRLLAC+ASRPGQCGRADGYILEGKELEFY++K++ Sbjct: 104 VDATPFRQWYESHYLLPLGRKKGAKLT-----EAED----AIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_DANRE (40S ribosomal protein S8 OS=Danio rerio GN=rps8 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.197e-21 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 123 IDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEA---KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 +D+ P++QWY HY + +GR P EE K+S V +K R+K + P +EEQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 104 VDSTPYRQWYESHYALPLGRKKGAKL------------TPEEEEILNKKRSKKVQKKFTLRRKTAKISPLLEEQFLQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_GRIJA (40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.851e-20 Identity = 58/113 (51.33%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRT-LDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 452 + IDA PF+Q+Y HYG+DIG+ + GD EE+K S K EKR + R LD I+E F SGRL A IASRPGQ GRADGY+LEGKELEFY K +Q+ Sbjct: 102 IQIDATPFRQYYHNHYGIDIGKK-------------KAGD----EESKFSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGRADGYLLEGKELEFYAKAMQK 197
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_CAEEL (40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.569e-20 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ 449 +S+DAAPF+QWY HY + + R EE +A + K+S H ++K +RQK +D + EQF +GRLLA I+S PGQ G+A+GYILEGKEL+FY++K++ Sbjct: 102 ISVDAAPFRQWYEAHYALPLARKKNAKL-------SEEDNAILNK--KRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARISSSPGQVGQANGYILEGKELDFYLRKIR 203
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8B_SCHPO (40S ribosomal protein S8-B OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.113e-18 Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKL 446 + IDAAPF+ WY HYG+ +G +G++ A T KS HV RK R D +D +E QF +GRL A ++SRPGQ GR DGYILEG+EL FY++++ Sbjct: 102 VQIDAAPFRVWYETHYGILMGS------------KGKKATATPTP---KSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196 The following BLAST results are available for this feature:
BLAST of CN181535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181535 ID=CN181535; Name=CN181535; organism=Citrus sinensis; type=EST; length=649bpback to top |