CN181535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8A_SCHPO (40S ribosomal protein S8-A OS=Schizosaccharomyces pombe GN=rps8a PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.605e-18 Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKL 446 + IDAAPF+ WY HYG+ +G +G + KS HV RK R D +D +E QF +GRL A ++SRPGQ GR DGYILEG+EL FY++++ Sbjct: 102 VQIDAAPFRVWYETHYGILMG---------------SKGKKATSTPNPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_YEAST (40S ribosomal protein S8 OS=Saccharomyces cerevisiae GN=RPS8A PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.049e-17 Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKL 446 + IDA PF+QW+ HYG +G+ + + E KS + RK R ++ +E QF +GRL ACI+SRPGQ GR DGYILEG+EL FY+++L Sbjct: 102 VQIDATPFRQWFEAHYGQTLGK---------------KKNVKEEETVAKSKNAERKWAARAASAKIESSVESQFSAGRLYACISSRPGQSGRCDGYILEGEELAFYLRRL 196
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_LEIMA (40S ribosomal protein S8 OS=Leishmania major GN=RPS8 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.205e-17 Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEA----KKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 452 +++DAAPFK+WY +HYG+D+ + A A + K S + R+ +R+++ ++ I +Q GR+LA I SRPGQ GRADG +LEG EL+FY+K+L++ Sbjct: 102 VAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEK 217
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_THEPA (40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 452 +++D PFK W+ HYG+++G+ ++E+ + S V + + D QF SGRLLACI+SRPGQCGR DGY+LEG+EL FY +++ + Sbjct: 102 VTVDPTPFKLWFKTHYGLELGK--------------------SSEDPQASEKVAALVPRTLLD---------QFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDK 184
BLAST of CN181535 vs. ExPASy Swiss-Prot
Match: RS8_THEAN (40S ribosomal protein S8 OS=Theileria annulata GN=RPS8 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14 Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 117 LSIDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXEGEEGDAPATEEAKKSSHVLRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQR 452 +++D PFK W+ HYGV++ E+ + S V + K + EQF SGRLLACI+SRPGQCGR DGY+LEG+EL FY +++ + Sbjct: 102 VTVDPTPFKLWFKTHYGVEL------------------------EDPQASEKVAGLVPKT---------LLEQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDK 180 The following BLAST results are available for this feature:
BLAST of CN181535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181535 ID=CN181535; Name=CN181535; organism=Citrus sinensis; type=EST; length=649bpback to top |