CN181498

Overview
NameCN181498
Unique NameCN181498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 96/197 (48.73%), Postives = 115/197 (58.38%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G PW     +ER  ++ K AD                 GKL S A + D+ G   TLRY AG ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAE TPL AL+   L K AG
Sbjct:   17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.708e-43
Identity = 98/197 (49.75%), Postives = 116/197 (58.88%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I++TK+FIN E+ DSVSGK F  ++P T E I  I EGDK DVD AVKAARQAF  G PW     +ER  ++ K AD                 GKL   A + D+ G   TLRY AG ADKI G  + M      YT  EP+GV G IIPWNFP  M   K+ PAL+ G T+IVKPAE TPL AL+ A L K AG
Sbjct:   12 KIQYTKIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASLIKEAG 208          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.108e-42
Identity = 93/197 (47.21%), Postives = 116/197 (58.88%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            + ++TK+FIN E+ DSVSGK F   +P T E +  + EGDKEDV+ AV AARQAF  G PW     +ER  ++ K AD                 GKL S A + D+ G   TLRY AG ADKI G  +        YT  EP+GV G I+PWNFP  MF  K++PAL+ G T++VKPAE TPL AL+ A L K AG
Sbjct:   16 KFQYTKIFINNEWHDSVSGKKFPVFNPATEEKLCEVEEGDKEDVNKAVAAARQAFQIGSPWRTMDASERGRLLYKLADLVERDRLILATMESMNGGKLFSNAYLMDLGGCLKTLRYCAGWADKIQGRTIPSDGNFFTYTRHEPVGVCGQILPWNFPLLMFLWKIAPALSCGNTVVVKPAEQTPLSALHVATLIKEAG 212          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.713e-42
Identity = 92/191 (48.17%), Postives = 111/191 (58.12%), Query Frame = 2
Query:  104 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            KL+I+G+FV S SG TF+T +P TGE +  + E    DVD AVKAAR+AFD G W   S A R  +M K AD                 GK  +    GDIP A   +RYYAG   KI G+ + +S A   YT  EP+GVVG IIPWNFP  M   K+  ALA GCT+++KPAE TPL ALY A L   AG
Sbjct:   21 KLYIDGKFVPSASGATFDTPNPATGETLMTLYEAQAADVDKAVKAARKAFDQGEWRTMSPASRSRLMYKLADLMEEHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWCTKITGQTIPVSGAYFNYTRHEPVGVVGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLSALYLAELIDQAG 211          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.535e-41
Identity = 90/200 (45.00%), Postives = 119/200 (59.50%), Query Frame = 2
Query:   80 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            + PE+ + ++FIN E+ D+VS KTF T++P TGE I ++A GDKEDVD AVKAAR AF  G PW R   ++R  ++ + AD                 GK +  + + D+      LRYYAG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K AE TPL ALY A+L K AG
Sbjct:   13 QQPEVFYNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAAGDKEDVDRAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAAKLGPALATGNVVVMKVAEQTPLTALYVANLTKEAG 212          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.324e-41
Identity = 91/200 (45.50%), Postives = 118/200 (59.00%), Query Frame = 2
Query:   80 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  G PW R   + R  ++ + AD                 GK +  + + D+      LRYYAG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K AE TPL ALY A+L K AG
Sbjct:   30 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 229          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.324e-41
Identity = 91/200 (45.50%), Postives = 118/200 (59.00%), Query Frame = 2
Query:   80 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  G PW R   + R  ++ + AD                 GK +  + + D+      LRYYAG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K AE TPL ALY A+L K AG
Sbjct:   30 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 229          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.324e-41
Identity = 90/200 (45.00%), Postives = 118/200 (59.00%), Query Frame = 2
Query:   80 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            + PE+ + ++FIN E+ D+VS KTF T++P TG+ I  +AEGDK DVD AVKAAR AF  G PW R   +ER  ++ + AD                 GK +  + + D+      LRYYAG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K AE TPL ALY A+L K AG
Sbjct:   33 QQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 232          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1B1_MOUSE (Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.324e-41
Identity = 93/198 (46.97%), Postives = 118/198 (59.60%), Query Frame = 2
Query:   86 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            PEI + KLFIN E+ D+VS KTF T++P TGE I  +AEGD+ DVDLAVKAAR+AF  G PW R   +ER  ++ + AD                 GK    + + D+       RY+AG ADK HG+ + M      +T  EP+GV G IIPWNFP  M   K++PALA G T+++K AE TPL ALY A L K AG
Sbjct:   34 PEICYNKLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAG 231          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.647e-41
Identity = 92/197 (46.70%), Postives = 118/197 (59.90%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I+ TK+FIN E+ DSVS K F  ++P T E I  + EGDK DVD AVKAARQAF  G PW     +ER  ++ K AD                 GK+ + A + D+  +   L+Y+AG ADKIHG+ +     +  YT REPIGV G IIPWN P  +F  K+ PAL+ G T++VKPAE TPL AL+ A L K AG
Sbjct:   17 KIQHTKIFINNEWHDSVSSKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPSDGNIFTYTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIKEAG 213          
The following BLAST results are available for this feature:
BLAST of CN181498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 355
Match NameE-valueIdentityDescription
AL1A1_BOVIN1.588e-4348.73Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
AL1A1_RABIT2.708e-4349.75Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
AL1A1_HORSE5.108e-4247.21Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
ALDH4_BACSU8.713e-4248.17Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
ALDH2_HORSE2.535e-4145.00Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
ALDH2_PONAB4.324e-4145.50Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HUMAN4.324e-4145.50Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
ALDH2_BOVIN4.324e-4145.00Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
AL1B1_MOUSE4.324e-4146.97Aldehyde dehydrogenase X, mitochondrial OS=Mus mus... [more]
AL1A7_MOUSE5.647e-4146.70Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181498 ID=CN181498; Name=CN181498; organism=Citrus sinensis; type=EST; length=680bp
GAGGTAATACCACAAAGATAGAGAAAGATAGAGAGAGATGGAGGGCAGTC
TTAGCAATGGAAGCTGCAAGTCTTTATTCAAGATGCCGGAGATCAAGTTC
ACGAAGCTGTTCATTAACGGAGAATTTGTTGATTCTGTTTCAGGGAAAAC
GTTTGAAACAATTGATCCAAGGACAGGAGAAGCAATAGCAAGAATTGCTG
AAGGAGACAAGGAGGATGTTGATCTTGCCGTCAAGGCAGCACGTCAGGCG
TTTGATCACGGTCCATGGCCACGTTTTTCTGGAGCCGAAAGGAGAGGGAT
AATGTTGAAGTTTGCGGACTTAATTGAAGAACACGCAGAGGTATTAGCGG
TGCTGGAAGCTCTTGATGCTGGCAAATTGCACAGTTGGGCCAAAATGGGC
GACATTCCAGGAGCTGCTAATACCCTTCGTTACTATGCTGGTGCAGCTGA
TAAAATACACGGAGAGGTTCTAAAAATGTCTCGGGCGTTACAGGGCTACA
CGTTGCGTGAGCCAATTGGCGTTGTTGGACACATCATTCCCTGGAATTTT
CCTACCACCATGTTTTTCATGAAGGTTAGCCCTGCGTTAGCCGCTGGGTG
CACAATGATTGTCAAGCCTGCTGAGCNAACTCCCCTTATTGCTCTTTATT
TTGCCCATCTTGCCAAGCTGGCTGGAGTAC
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