CN181497

Overview
NameCN181497
Unique NameCN181497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length317
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.174e-22
Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPVM ++KF   E+ I  ANN K GLAA + TKDL+ AN +S++++   +W+NCY  F +  P+GGYK+SG GR+ G+  L  Y +VK+
Sbjct:  417 AKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKT 511
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.174e-22
Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   ++ IK ANN   GLAA + TKD++ A T + +++   +W+NCY AF + CP+GG+KMSG GR+ G+  L  Y +VK+
Sbjct:  405 AKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKT 499
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.451e-22
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPVM ++KF   E+ +  ANN K GLAA + TKDL+ AN +S++++   +W+NCY  F +  P+GGYK+SG GR+ G+  L  Y +VK+
Sbjct:  416 AKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKT 510
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.120e-22
Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPVM ++KF   E+ +  AN+ K GLAA + TKDL+ AN +S++++   +WINCY  F +  P+GGYKMSG GR+ G+  L  Y +VK+
Sbjct:  415 AKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 509
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.120e-22
Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   ++ IK ANN   GL AG+ TKDL+ A TVS +++   +W+NCY A  +  P GG+KMSG GR+ G+  +H Y +VK+
Sbjct:  397 AKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKT 491
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.120e-22
Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   ++ IK ANN   GL AG+ TKDL+ A TVS +++   +W+NCY A  +  P GG+KMSG GR+ G+  +H Y +VK+
Sbjct:  397 AKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKT 491
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.120e-22
Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   +  IK ANN   GL+AG+ TKD++ A T+S +++   +W+NCY    + CP+GG+KMSG GR+ G+   H Y +VK+
Sbjct:  397 AKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKT 491
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.299e-22
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   +  IK ANN   GL+AGI T D++ A TVS +++   +W+NCY    + CP+GG+KMSG GR+ G+   H Y +VK+
Sbjct:  397 AKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKT 491
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 9.299e-22
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   +  IK ANN   GL+AGI T D++ A TVS +++   +W+NCY    + CP+GG+KMSG GR+ G+   H Y +VK+
Sbjct:  397 AKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKT 491
[Close]
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.214e-21
Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = -3 
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPVM ++KF   E+ +  ANN   GLAA + TKDL+ AN +S++++   +W+NCY  F +  P+GGYKMSG GR+ G+  L  Y +VK+
Sbjct:  413 AKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYNVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 507
The following BLAST results are available for this feature:
BLAST of CN181497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
ALDH2_PIG4.174e-2249.47Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
AL1A1_CHICK4.174e-2248.42Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
ALDH2_BOVIN5.451e-2248.42Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH2_MOUSE7.120e-2249.47Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH1_MACPR7.120e-2249.47Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
ALDH1_ELEED7.120e-2249.47Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
AL1A1_HUMAN7.120e-2247.37Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A1_SHEEP9.299e-2248.42Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]
AL1A1_BOVIN9.299e-2248.42Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
ALDH2_PONAB1.214e-2148.42Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181497 ID=CN181497; Name=CN181497; organism=Citrus sinensis; type=EST; length=317bp
CCTTTTCTCAAAAAAAATGGGAGCCATTTTGGACTTGACCTGCAGATAGT
GATGTAGAGATTTTTTTCCACAGTCTCGACCAAATCCACTCATCTTGTAT
CCTCCGTAAGGGCAGTCGCTGTCAAAAGCAAAATAACAATTGATCCATAT
AATTTTTTTTCGAATTGATCTAGAGACGGTATTAGCCACATTCAAGTCCT
TTGTCATAATGCCTGCTGCTAGGCCATTTTTTTTATTATTTGCACTCTTA
ATTGTTTTTTCGGCAAAAAAAAATTTCATCAATGCCATCACAGGTCCGAA
AATTTCATTCTTTGCTA
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