CN181493

Overview
NameCN181493
Unique NameCN181493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:814..1451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.895e-12
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = -2
Query:  272 PVEVSFTVYEDFAHYKSGVY--KHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 496
            PV ++F V   F  YKSGVY   H     M   HAV  +G+G  +DG  YW++ N W   WG  GYFK++ G N CGI
Sbjct:  272 PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGI 348          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.393e-12
Identity = 36/81 (44.44%), Postives = 46/81 (56.79%), Query Frame = -2
Query:  272 PVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 496
            PV V+F V   F  YKSGVY   T D  G       HAV  +G+G  ++G  YW++ N W   WG +GYFK++ G N CGI
Sbjct:  276 PVSVAFQVINGFRMYKSGVY---TSDHCGTSPMDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGI 352          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.393e-12
Identity = 46/135 (34.07%), Postives = 68/135 (50.37%), Query Frame = -2
Query:  212 KKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG----SNECGIEEDVVAGLPSSKNLVKEITS 598
            K N L +NS+  +I  Y  + S  E  +       PV V+       F HY+SG++    G  M  HAV  +G+G S++G DYWI+ N W   WG DGY +++R     S +CGI  +    +  S N V+  +S
Sbjct:  195 KCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMD-HAVVAVGYG-SENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPVKYSPNPVRGTSS 327          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11
Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = -2
Query:  272 PVEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 496
            PV V+F V + F  YKSGVY   T D  G       HAV  +G+G  ++G  YW++ N W   WG +GYFK++ G N C I
Sbjct:  275 PVSVAFQVIDGFRQYKSGVY---TSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAI 351          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = -2
Query:  254 DPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 535
            D   ++  +YKNGP+ V+     D   Y+SG+   +  D    HAV L+G+G  +D   YWI  N W  +WG +GYF+ +R  N CG+  +  A
Sbjct:  242 DERKLLELLYKNGPIAVAIDCV-DIIDYRSGIAT-VCNDNGLNHAVLLVGYGIEND-TPYWIFKNSWGSNWGENGYFRARRNINACGMLNEFAA 332          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = -2
Query:  272 DPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG-SNECGI 535
            D E +   +   GPV V+    +E F  Y  GVY     D     H V ++G+GT + G DYW++ N W  +WG  GY K+ R  +N+CGI
Sbjct:  240 DEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGI 330          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = -2
Query:  272 NGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 502
            NGP+ V+  V  D  +YK+G+      +    HAV L+G+G  +D   YWIL N W   WG +GYF+++R  N CG+
Sbjct:  249 NGPISVAIDV-SDLINYKAGIADICENNEGLNHAVLLVGYGVKND-VPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 33/81 (40.74%), Postives = 45/81 (55.56%), Query Frame = -2
Query:  272 PVEVSFTVYEDFAHYKSGVYKHITGDVMGG------HAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 496
            PV V+F V  +F  YK GV+   T +  G       HAV  +G+G  DD   YW++ N W   WG +GYFK++ G N CG+
Sbjct:  272 PVSVAFEVVHEFRFYKKGVF---TSNTCGNTPMDVNHAVLAVGYGVEDD-VPYWLIKNSWGGEWGDNGYFKMEMGKNMCGV 348          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = -2
Query:  197 PVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNE----CGIEEDVVAGLPSSKNLVKEITSADMFE 496
            P+ V  +   + + YKSGVYK    ++ G H V ++G+GTS D  DYW++ N W   WG  GY +++R  +E    C +   V    P   N    + S  +F+
Sbjct:  261 PISVMISA-ANMSDYKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEPTGKCAVA--VAPVYPIKSNSSSHLLSPSVFK 361          
BLAST of CN181493 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = -2
Query:  254 INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 544
            I  + E++  E+   GP+ ++       + Y  G+  H   ++   HAV L+G+GT + G  YW L N W   WG DGYF++KR  N CG+   + A
Sbjct:  239 IFQNEENLKKELITMGPIAMAIDA-ASISTYSKGII-HFCENLGLNHAVLLVGYGT-EGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAA 332          
The following BLAST results are available for this feature:
BLAST of CN181493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
ALEU_ARATH4.895e-1244.87Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
ORYC_ORYSJ6.393e-1244.44Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP4_BRANA6.393e-1234.07Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
ALEU_HORVU1.090e-1143.21Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATV_NPVST1.860e-1136.17Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATL_SARPE1.860e-1137.36Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATV_GVCP2.429e-1140.26Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
ALEUL_ARATH2.429e-1140.74Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CPR2_ARATH4.144e-1132.69Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATV_NPVAH4.144e-1134.02Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181493 ID=CN181493; Name=CN181493; organism=Citrus sinensis; type=EST; length=638bp
GAGGTTTTTTATTACAACTGGTTCTATTTTTACACACAACATTAAACTCC
ATTAATACATTCAATTATGCAAGACGGGAGCTTCCCATTTCATGCCTTGA
TAGCTTAGGTTCAACGATACACCCCTATAGCTACACATTTGATATATAAA
TAACAACATGAAGGTATAGCAAAGTCTGCTCTCAAGCTGAAGCATCCTCA
AACATATCTGCACTTGTAATCTCTTTGACAAGATTTTTGGATGAAGGCAA
ACCAGCAACCACATCCTCTTCAATACCACACTCATTTGATCCTCTTTTAA
TCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCCACTGATTAGCGAGA
ATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAACCAATAAGCTTAAC
AGCATGACCCCCCATTACATCGCCTGTGATGTGTTTGTAGACCCCAGATT
TGTAGTGAGCAAAATCCTCATAAACTGTGAAGGAAACTTCAACTGGTCCA
TTCTTGTAAATTTCTGCCATTATGTCCTCTGGATCAGAATTGATTCTATA
TGCACTAATACTGTAGTGCTTTGAATTCCTCCAAAGCTGGTTTTTCTTGA
CGCACTTCCTCACACACTTTGGAGTAGGATATGCCGGC
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