CN181489

Overview
NameCN181489
Unique NameCN181489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:607..1273. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.290e-22
Identity = 55/133 (41.35%), Postives = 87/133 (65.41%), Query Frame = -3
Query:   72 VGITSHTDPGPLTILLQ-DDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 467
            +G++ H+D   LT+L+Q ++  GL IK  E+WV +KP+ GA V+NIGD+++IMSN  Y S+EHR + N+  E R+SIA F  P E  +  GP P+L+  E   +++   + DY+ R    +LDGK+L++  +L
Sbjct:  223 LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKE-RLSIAAFHDP-EYGTKIGPLPDLVK-ENGVKYKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.290e-22
Identity = 63/183 (34.43%), Postives = 95/183 (51.91%), Query Frame = -3
Query:  111 PEICRKEAVEWNHHVKQXXXXXXXXXXXXXXLKTDRLKEKTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTK 653
            P   R+   E+  HVK+              LK D LKE    E    MM  +YYP CP+PDL +G+ +HTD   +T+L+ ++  GLQ+   + W D + +P A++++IGD +  +SN  Y +V HR   +   + R+S  VF  P  R+ + GP PEL   + P +F+ F   DY  R   K
Sbjct:  152 PPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKE-KTRMSWPVFLEP-PREKIVGPLPELTGDDNPPKFKPFAFKDYSYRKLNK 332          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = -3
Query:  132 MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDY 515
            +M  +YYP CP+PDL +G+ +HTD   +T+L+ ++  GLQ+     W D K +P AL+++IGD ++IMSN +Y SV HR   N   + R+S  VF  P   D   GP P+L++ E PA+F+   + DY
Sbjct:  200 LMKINYYPPCPRPDLALGV-AHTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKE-KTRMSWPVFLEPPP-DHEVGPIPKLVNEENPAKFKTKKYKDY 324          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 54/136 (39.71%), Postives = 85/136 (62.50%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKP-ARFRQFTHTDYITRFFTKQLDGK 497
            YP CP+PDL  G+ +HTD G + +L QDD+ GGLQ+    EWVDV P+  ++V+N+GD L++++N  Y SV HRV+A +    R+SIA F++P   D++  P P L+  E+    + +F   DY+  +   + + K
Sbjct:  168 YPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGN-RMSIASFYNPGS-DAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAK 301          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22
Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = -3
Query:   84 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEE-WVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYIT---RFFTKQLDGKTLVN 503
            ++YP CP+P+  +G+ +HTD   LTIL Q + GGLQ+   E  WV V+P PG LV+NIGD+  I+SN +  SV HR   N +   RISIA  +     D    P  +L  P +P+ +R  T  +Y+      F K +D   +VN
Sbjct:  210 NHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHT-RSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQIKYEVFDKAMDAIRVVN 352          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22
Identity = 54/136 (39.71%), Postives = 84/136 (61.76%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKP-ARFRQFTHTDYITRFFTKQLDGK 497
            YP CP+PDL  G+ +HTD G + +L QDD  GGLQ+    EWVDV P+  ++V+N+GD L++++N  Y SV HRV+A +    R+SIA F++P   D++  P P L+  E+    + +F   DY+  +   + + K
Sbjct:  168 YPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGN-RMSIASFYNPGS-DAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAK 301          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.329e-22
Identity = 63/142 (44.37%), Postives = 78/142 (54.93%), Query Frame = -3
Query:   93 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARF-----RQFTHTDYITRFFTKQLDGKT 503
            +YYP CP+P+ T+G   H DP  LTILLQDD GGL++    EW  V PVPGA+VINIGD    +SN  Y S  HR + N   E R S+A F  P E D +  P P   +P+    F      +FT   Y  R  T+ LD  T
Sbjct:  232 NYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERR-SLAFFLCPRE-DRVVRPPPSAATPQHYPDFTWADLMRFTQRHY--RADTRTLDAFT 369          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.329e-22
Identity = 63/142 (44.37%), Postives = 78/142 (54.93%), Query Frame = -3
Query:   93 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARF-----RQFTHTDYITRFFTKQLDGKT 503
            +YYP CP+P+ T+G   H DP  LTILLQDD GGL++    EW  V PVPGA+VINIGD    +SN  Y S  HR + N   E R S+A F  P E D +  P P   +P+    F      +FT   Y  R  T+ LD  T
Sbjct:  232 NYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERR-SLAFFLCPRE-DRVVRPPPSAATPQHYPDFTWADLMRFTQRHY--RADTRTLDAFT 369          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.329e-22
Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = -3
Query:   96 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI----SPEKPARFRQFTHTDYITRFFTKQLDGK 497
            YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+     W+DV P+  A+V+N+GD L++++N  Y SV HRVL  +S   R+SIA F++P   D++  P P L+      EK   + +F   DY+  +   +   K
Sbjct:  162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGS-DAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAK 299          
BLAST of CN181489 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = -3
Query:   99 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDG 503
            ++YP CPQP+L +G  +HTD   LT +L +   GLQ+ + ++WV  K VP +++++IGD L+I+SN +Y S+ HR L N   + RIS AVF  P +   +  P PE +S  +P RF   T   ++     ++ DG
Sbjct:  221 NFYPKCPQPELALGWEAHTDVSALTFILHNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDG 354          
The following BLAST results are available for this feature:
BLAST of CN181489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
NCS1_COPJA3.290e-2241.35S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FLS1_ARATH3.290e-2234.43Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_EUSGR4.297e-2241.41Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
ACCO1_ORYSJ4.297e-2239.711-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
G3OX4_ARATH5.611e-2239.58Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
ACCO1_ORYSI5.611e-2239.711-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
GAOX2_ORYSJ7.329e-2244.37Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI7.329e-2244.37Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
ACCO1_CUCME7.329e-2239.571-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
LDOX_PERFR9.572e-2238.52Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181489 ID=CN181489; Name=CN181489; organism=Citrus sinensis; type=EST; length=667bp
GAATTGTTATTCTTACGTAAGAATAGTTTATACAGGCACAAACAACCAGA
TTTACCAAGTTTTGTTTCTTACAGCCTATAGTAATTCACCAATGTTTTTC
CATCTAACTGTTTTGTGAAGAACCTTGTTATATAGTCCGTGTGTGTGAAC
TGCCGAAAACGAGCTGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTCC
ATAAAGGCTGTCCCTCTCGCTTGGACTGAAGAAAACAGCAATTGAGATTC
GTGGTTCCGGGGACGAATTAGCCAATACTCTATGCTCTACACTTATGTAT
TCATCATTGGACATAATCTGAAGTATATCCCCAATGTTAATAACCAGAGC
TCCTGGAACTGGTTTAACATCCACCCATTCCTCACCATGCTTAATTTGCA
GCCCACCTTTATCATCTTGCAACAAGATTGTCAATGGCCCTGGATCAGTA
TGAGATGTGATCCCCACTGTCAGATCAGGCTGCGGACAGTAGGGATAATA
ATGGCCCACCATCATCCTCCCTTCCAGGAAGGTCTTTTCCTTCAACCTAT
CGGTTTTCAACCCCAAACCTTCACACAGCAGCCCAAACAAAAGCTCTCCG
AGCTGTTTTACATGGTGGTTCCACTCGACTGCCTCTTTCCTACATATTTC
AGGAACTTCTTCAAGCT
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