CN181474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16 Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F DF L+ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ TL+ +P ++ AL++ TRELA Q + I V GG N++ Sbjct: 31 FEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR 138
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 55/123 (44.72%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + + ALVL TRELA QI Y+ A GG N++ L+ E P IV Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIV 156
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + A+++ TRELA Q + +L I+V V GG ++K Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK 240
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q + +L I+V V GG ++K Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK 233
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15 Identity = 44/78 (56.41%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 513 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN Q AL+L TRELA QI Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQI 109
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15 Identity = 53/126 (42.06%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 256 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 + F LKPELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL+L TRELA QI ++ +I+ GG N++ L+ E P +V Sbjct: 24 TDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTNVREDMKALQ-EGPQVV 147
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15 Identity = 44/78 (56.41%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 280 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 513 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN Q AL+L TRELA QI Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQI 109
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15 Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP 624 F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L+ P ++ L+L TRELA Q + +L I V V GG ++ D+L+ + P Sbjct: 38 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTTLR--DDILRLQDP 154
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 591 F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + ++L TRELA Q + +L I+V V GG ++K Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK 243
BLAST of CN181474 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 55/123 (44.72%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 265 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPPIV 633 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Y+ A GG N++ L+ E P IV Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIV 156 The following BLAST results are available for this feature:
BLAST of CN181474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181474 ID=CN181474; Name=CN181474; organism=Citrus sinensis; type=EST; length=634bpback to top |