CN181473

Overview
NameCN181473
Unique NameCN181473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2887 contig Csv1_Contig2887:84..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_CANAL (Multiprotein-bridging factor 1 OS=Candida albicans GN=MBF1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.417e-21
Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +NAARRAG  + T +K   GT    S+       KLD   + +A  +V   + KAI QAR +KKLTQ +LA  +NEKP VI +YE+G+AIPNQQ+L KLERALGVKLR
Sbjct:   33 LNAARRAGLVVGTEKKY--GTANTKSNPEGQRLTKLDATDDVVAVKKVDVSVGKAIQQARQEKKLTQKELATKVNEKPNVINDYEAGRAIPNQQLLAKLERALGVKLR 138          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_DEBHA (Multiprotein-bridging factor 1 OS=Debaryomyces hansenii GN=MBF1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +NAARR+G  + T +K   G+    S+       KLD   + +   ++   + KAI QAR +KKLTQ  LA  INEKP VI +YE+G+A+PNQQ+L KLERALGVKLR
Sbjct:   32 LNAARRSGNVVGTEKKY--GSTNTKSNPEGQRLTKLDAVDDVVPTKKLDMNVGKAIQQARQEKKLTQKDLATKINEKPNVINDYEAGRAVPNQQLLGKLERALGVKLR 137          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_YARLI (Putative multi-protein-binding factor 1 OS=Yarrowia lipolytica GN=MBF1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.052e-19
Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +NAA R+G  + T +K  +  +K       L   K+D   + +A  +V + + KAI++ R++K LTQ +LA  INEKPQV+ +YESG+A PNQQ+L+K+ER LG+KLR
Sbjct:   33 INAAMRSGNVLSTDKKYASANSKDGGDGQRLT--KIDRSDDIIAPPKVEASVGKAIIKGRSEKGLTQKELAVKINEKPQVVNDYESGRAQPNQQVLSKMERVLGIKLR 138          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_KLULA (Multiprotein-bridging factor 1 OS=Kluyveromyces lactis GN=MBF1 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.210e-19
Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +N ARR+G  +   +K   GT  + SS       K+D +T+ +   ++   + KAI + R DK LTQ  LA  INEKP ++ +YESG+ IPNQQIL K+ERALG+KLR
Sbjct:   32 INEARRSGMVLSVDKKY--GTTNSKSSPEGQRLTKVDRETDIVKPKKIDVSVGKAIQKGRQDKNLTQKDLATKINEKPTIVNDYESGRGIPNQQILGKMERALGIKLR 137          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_ASHGO (Multiprotein-bridging factor 1 OS=Ashbya gossypii GN=MBF1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.210e-19
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +NAARRAG  + +V K +A +N  A++     T  +D +T+ +   ++   + +AI + R DK +TQ  LA  INEKP VI +YE+G+AIPNQQIL K+ERALGVKLR
Sbjct:   33 INAARRAGL-VLSVDKKYASSNTKANNEGQRLTM-VDRETDIVKPKKLDPSVGRAIAKGRGDKGMTQKDLATRINEKPTVINDYEAGRAIPNQQILAKMERALGVKLR 138          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_YEAST (Multiprotein-bridging factor 1 OS=Saccharomyces cerevisiae GN=MBF1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-18
Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +NAARR G  + +V K +  TN    +     T K+D +T+ +   ++   + +AI +AR DKK++Q  LA  INEKP V+ +YE+ +AIPNQQ+L+KLERALGVKLR
Sbjct:   32 INAARRQGL-VVSVDKKYGSTNTRGDNEGQRLT-KVDRETDIVKPKKLDPNVGRAISRARTDKKMSQKDLATKINEKPTVVNDYEAARAIPNQQVLSKLERALGVKLR 137          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_CANGA (Multiprotein-bridging factor 1 OS=Candida glabrata GN=MBF1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.018e-17
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +NAARR G  +   +K      K  +    L   K+D +T+ +   ++ + + K I + R +KK++Q  LA  INEKP VI +YE+G+AIPNQQ+L K+ERALGVKLR
Sbjct:   32 INAARRQGLVLSVDKKYGTANTKGDAEGQRLT--KVDRETDIVKPKKLDANVGKTIARVRTEKKMSQKDLATKINEKPTVINDYEAGRAIPNQQVLGKMERALGVKLR 137          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_SCHPO (Multiprotein-bridging factor 1 OS=Schizosaccharomyces pombe GN=mbf1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17
Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = -3
Query:  182 VNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 505
            +N+ARRAGA + T +K   G      +   L   K+D + E          + +AI + R  K   Q  L+Q INEKPQV+ +YESG+AIPNQQ+L+K+ERALG+KLR
Sbjct:   29 INSARRAGAIVGTEKKYATGNKSQDPAGQHLT--KIDRENEVKPPSTTGRSVAQAIQKGRQAKGWAQKDLSQRINEKPQVVNDYESGRAIPNQQVLSKMERALGIKLR 134          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: VSH7_DICDI (Vegetative-specific protein H7 OS=Dictyostelium discoideum GN=cinD-1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.730e-15
Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = -3
Query:  182 DIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQARNDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 478
            D++T  K  AG NK    +   N +K+ E  E++A   +   + +AI +ARN  K+TQ +LA  INE+P VI EYESG AIP+Q +L+KLE+AL VKLR
Sbjct:    2 DVQT--KYGAGQNKVLGGA---NQKKIVESEEDIALPELNPSVPQAIQRARNALKMTQKELAFKINERPGVINEYESGSAIPSQAVLSKLEKALNVKLR 95          
BLAST of CN181473 vs. ExPASy Swiss-Prot
Match: MBF1_CRYNE (Multiprotein-bridging factor 1 OS=Cryptococcus neoformans GN=MBF1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.552e-13
Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = -3
Query:  182 DWEPVVIXXXXXXXXXXXXXKVVNAARRAGADIETVRKSHAGTNKAASSSTSLNTRKLDEDTENLAHDRVPSELKKAIVQAR------NDKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQILTKLERALGVKLR 571
            DW+   +               +NAA+RAG  I +  K  AG +K  +    +   KLD D      ++V +++ KA+  AR        K +TQ +LA  +N KPQ I + ESG+A+P+Q +L KLER L VKLR
Sbjct:    3 DWDKPTVIGFRQQKPTVAKGSTLNAAQRAGLVISSESKG-AGQSKGPADHQRI--AKLDRDDAPKPPEKVSADVGKAVATARMAIKNAEGKSMTQKELATSVNAKPQDIADLESGRAVPDQALLGKLERKLNVKLR 135          
The following BLAST results are available for this feature:
BLAST of CN181473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
MBF1_CANAL4.417e-2152.78Multiprotein-bridging factor 1 OS=Candida albicans... [more]
MBF1_DEBHA5.399e-1949.07Multiprotein-bridging factor 1 OS=Debaryomyces han... [more]
MBF1_YARLI7.052e-1944.44Putative multi-protein-binding factor 1 OS=Yarrowi... [more]
MBF1_KLULA9.210e-1945.37Multiprotein-bridging factor 1 OS=Kluyveromyces la... [more]
MBF1_ASHGO9.210e-1948.15Multiprotein-bridging factor 1 OS=Ashbya gossypii ... [more]
MBF1_YEAST2.052e-1846.30Multiprotein-bridging factor 1 OS=Saccharomyces ce... [more]
MBF1_CANGA1.018e-1743.52Multiprotein-bridging factor 1 OS=Candida glabrata... [more]
MBF1_SCHPO2.268e-1744.44Multiprotein-bridging factor 1 OS=Schizosaccharomy... [more]
VSH7_DICDI4.730e-1547.47Vegetative-specific protein H7 OS=Dictyostelium di... [more]
MBF1_CRYNE7.552e-1335.29Multiprotein-bridging factor 1 OS=Cryptococcus neo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181473 ID=CN181473; Name=CN181473; organism=Citrus sinensis; type=EST; length=639bp
GAGGTAAAAGGCTTAATAGATTCAGTCGTGACAAGAGTAACAGTCAAGGA
CACTAGTTATGTGCCGAGCCATAACCATAGGAGAAAACATTCATATACAG
CACCCATTTTGAAGACTCAACAACAGGACACAACATCAAGTCCCGGTAGA
AGTTTTTATTTATCCCTCCTCACTTCTTTCCTCGAAGCTTCACACCAAGG
GCCCTCTCCAGCTTGGTAAGTATCTGCTGATTTGGAATGGCTTTTCCTGA
TTCATATTCCTGAATCACCTGGGGCTTCTCATTGATCAACTGAGCAAGTT
GAGACTGGGTAAGTTTCTTATCATTTCGTGCCTGAACAATGGCTTTCTTG
AGTTCGCTAGGCACTCGATCATGAGCAAGGTTCTCTGTATCTTCATCAAG
CTTCCTGGTGTTCAGAGAAGTGCTACTCGAGGCAGCCTTGTTTGTGCCAG
CATGTGATTTTCTGACAGTCTCGATATCGGCACCGGCGCGTCGGGCAGCG
TTAACGACCTTCTCGTCCTTCTTGGCGGCGGCGTTGGGGGCTTTCTTCTT
AATCACCACCGGCTCCCAGTCCTGTGTGATCGGTCCGATTCCGGCCATGT
CCACTCCTCGATCAAATATCTCTTCACTTAAAAGATTTT
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