CN188561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR---DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P+ VL GPPGTGKT A+ +A + + V +++K+ GE RL+ ++F LA E +I+F+DE+D+ A R + +R + LL ++DGF+ V VIAATNR +DPA++ RFD +I LP R EI Sbjct: 173 PKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLARE-KAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEI 318
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 54/153 (35.29%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 P+ VL GPPGTGKT A+ IA +AGVP + + + G +F+ A + + I+F+DE+D+ R + + ++ + L+ +L ++DGF + V+VIAATNR + LD AL+ RFD ++ GLPD R+EI +++ Sbjct: 257 PKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKA-KANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSR 408
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH 521 P+ VL GPPGTGKT A+ IA +AGVP + + + G + +F A E +IF+DE+D+ R + + ++ + L+ LL ++DGFE + +++IAATNR LD AL+ RFD + PD+ R+EI +A++ Sbjct: 205 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE-NAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARN 357
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 3 Query: 84 VLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKK-VVVIAATNRKQDLDPALISRFDSMITFGLPDHENR 491 +L GPPGTGK+ A+ +A +AG + ++SK+ GESERL+ ++F +A E +IIF+DE+DS +R E++RRI + L Q++G +D+ V+V+ ATN LD A+ RF+ I LP+ R Sbjct: 165 ILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMARE-QKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHAR 300
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 64/209 (30.62%), Postives = 103/209 (49.28%), Query Frame = 3 Query: 18 PEVYDDIALETRCKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR--------DSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKHXXXXXXXXXXXXXXXM---SGRDIRDVCQQA 605 PE+++ + + +P+ V+ GPPGTGKT AR +A+ + V ++ KY GE +++ ++F +A E +IIF+DE+DS R DSE+ +R + LL Q+DGFE + + +I ATNR LDPAL+ R D I F P+ R +I +++ + SG +I+ C +A Sbjct: 179 PELFESLGIA--------QPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMARE-HAPSIIFMDEIDSIGSTRTEGGKGGGDSEV----QRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEA 374
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 63/156 (40.38%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 57 KFES---NRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVAR-DSEM--HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 KFE+ P+ VL GPPGTGKT AR A Q + + ++ + G+ +L+ FSLA E +IIF+DE+D+ R DSE +R + LL Q+DGF+ +V VIAATNR LDPAL+ R D I F +P+ E R I Sbjct: 176 KFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKE-KAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARI 330
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 42 LETRCKFES---NRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 L+ K+ES P+ VL GPPGTGKT AR A +AGV ++ Y G + + +F+ A AIIF+DE+D+ R+ + ++ L+ LL ++DGF Q +++I ATN + LD AL RFD ++ LPD R +I + K Sbjct: 300 LKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAP-AIIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMK 462
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 57/167 (34.13%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 42 LETRCKFES---NRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAK 518 L+ C++++ P+ VL GPPGTGKT AR +A +AGVP + + + G + +F A + + IIF+DE+D+ R + + H+ + L+ LL ++DGF V++IAATNR LDPAL+ RFD I PD R+ + ++K Sbjct: 182 LQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQ-NSPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSK 347
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 75 PRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEM---HEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEI 500 P+ +L GPPGTGKT AR IA +A VP + + + G + +F A + +IF+DE+D+ R + + H+ + L+ +L ++DGF + V+VIAATNR LDPAL RFD + GLPD + R++I Sbjct: 184 PKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKK-NAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQI 329
BLAST of CN188561 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 63/194 (32.47%), Postives = 90/194 (46.39%), Query Frame = 3 Query: 57 KFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLMYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARD----SEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALI--SRFDSMITFGLPDHENRQEIAAQYAKH-----XXXXXXXXXXXXXXXMSGRDIRDVCQQA 605 K + PR + GPPGTGKT A+ A +AGVP +V + + G + +F A E +I+F+DE+D+ AR S ++ L+ +L ++DGF VVV+A TNR LD AL+ RFD I P+ E R+ I A + H SG DI +VC +A Sbjct: 375 KMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARE-NAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEA 567 The following BLAST results are available for this feature:
BLAST of CN188561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188561 ID=CN188561; Name=CN188561; organism=Citrus sinensis; type=EST; length=707bpback to top |