FC921828

Overview
NameFC921828
Unique NameFC921828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC921828 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.800e-12
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = -2 
Query:    3 LPAIAXXXXXXXXXXXVLESIVGKDFLPRGSGIVTGGPLVWQLHKL---EEGS--REYAEFLHIPRKRFTDIAAVRKGIQEETDRETG 251
            LP I            VLE+IVG+DFLPRGSGIVT  PL+ QL  L   ++GS  +E+ EFLH P   F D + +R+ I  +TDR TG
Sbjct:   25 LPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIADDGSQTQEWGEFLHKPNDMFYDFSEIREEIIRDTDRMTG 112
The following BLAST results are available for this feature:
BLAST of FC921828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
DYNA_DICDI6.800e-1247.73Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC06052H05T7 RindPdigS Citrus sinensis cDNA clone C06052H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921828 ID=FC921828; Name=FC921828; organism=Citrus sinensis; type=EST; length=303bp
CCACCAGTCTCTCTATCAGTCTCCTCTTGAATCCCTTTCCTCACCGCAGC
AATATCGGTAAATCTTTTCCTTGGAATGTGAAGAAACTCTGCATATTCTC
TGCTGCCTTCTTCCAGTTTATGAAGCTGCCACACCAGAGGACCCCCTGTA
ACGATACCCGATCCCCGCGGTAAAAAGTCCTTGCCAACAATACTCTCCAA
CACTGATGACTTTCCAGAACTCTGGCCACCGACGACGGCGATAGCAGGAA
GAGAGTCCCAAAGAGTAGGCAATGCGCTGGCTTCACCGTGGTCGCCAAGA
GCC
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