CK940039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.814e-46 Identity = 91/198 (45.96%), Postives = 126/198 (63.64%), Query Frame = 1 Query: 223 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQE 816 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ ATN G + Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQ 202
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.151e-45 Identity = 91/198 (45.96%), Postives = 126/198 (63.64%), Query Frame = 1 Query: 223 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATNIVVPGQE 816 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ ATN G + Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHGATNATHAGNQ 202
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.151e-45 Identity = 91/181 (50.28%), Postives = 130/181 (71.82%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 750 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R VTS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.151e-45 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 750 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.151e-45 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 750 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.151e-45 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 750 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.504e-45 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 750 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.504e-45 Identity = 89/168 (52.98%), Postives = 126/168 (75.00%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 711 N DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNKSDL T + V AKE+A++ G+ F+ETSA +TNVE AF+T+ EI Sbjct: 5 NPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.964e-45 Identity = 90/191 (47.12%), Postives = 124/191 (64.92%), Query Frame = 1 Query: 223 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDXXXXXXXXXXXKATN 795 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ ATN Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATN 195
BLAST of CK940039 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.964e-45 Identity = 89/168 (52.98%), Postives = 125/168 (74.40%), Query Frame = 1 Query: 208 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 711 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNK DL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169 The following BLAST results are available for this feature:
BLAST of CK940039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK940039 ID=CK940039; Name=CK940039; organism=Citrus sinensis; type=EST; length=867bpback to top |