CK940034

Overview
NameCK940034
Unique NameCK940034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 83/244 (34.02%), Postives = 132/244 (54.10%), Query Frame = 3
Query:  186 NAYMVKSSAGTDGAYHASEAAPKGAQAVKV-------------QPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 845
            +A +   S+G    Y A +    G++A  V             Q   + + S  ELK  T NF  ++++GEG +G V+ G +           +G   A+KKL+    Q  +E+LA+V+ + +  H + V+L+GYC++   R+L YEF   GSL + L  R+G+   QP   LSW+ R+K+A+GAAKGL +LH  ++  +I+RD   SN+L+  +  AK++DF L+   P       STRV+GT
Sbjct:    6 SAQVKAESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF-RRGLY-FQP---LSWKLRLKVALGAAKGLAFLH-SSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGT 243          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27
Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 3
Query:  285 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK---QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDL 788
            E     + ELK+ T  F     +G GS+G VY  +L  G   A+K+ +A+      +  F +++ ++ +++H N V LLGYC +   R+L YE+  +G+LHD LHG            L W  R+KI + AA+GL+YLH + DP IIHRD+  SN+L+  +  A+IADF L
Sbjct:  503 ETKIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGDLSQ--------LDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGL 665          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.947e-27
Identity = 66/183 (36.07%), Postives = 102/183 (55.74%), Query Frame = 3
Query:  300 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 845
            S  E++  T NF    ++G+G +G VY G L +G   A+K+L D     + +F  +V M+    H N ++L G+C+    R+L Y +  NGS+ D L    G K     P L W +R+ IA+GAA+GL YLHE+ +P IIHRD+  +N+L+ +   A + DF L+       + + +T V GT
Sbjct:  289 SFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEK-----PSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHV-TTAVRGT 465          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.947e-27
Identity = 66/187 (35.29%), Postives = 102/187 (54.55%), Query Frame = 3
Query:  297 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSNQAPDMAARLH--STRVLGTF 848
            +  + LK  T+NF +   +G G +G VY G+   G   A+K+L   S Q D EF  ++ ++++L+H N V+L+G+C+ G  R+L YEF  N SL   +         +   +L W  R K+  G A+GL YLHE +   IIHRD+  SN+L+  +   KIADF L+          H  ++R+ GT+
Sbjct:  345 VHFETLKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIF------DTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTY 525          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.947e-27
Identity = 74/203 (36.45%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  273 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 848
            +Q   + + +  ELK  T NF  ++++GEG +G V+ G +           +G   A+KKL+    Q  +E+LA+V+ + +  H N V+L+GYC++   R+L YEF   GSL + L  R      QP   LSW  R+K+A+GAAKGL +LH  A+  +I+RD   SN+L+  +  AK++DF L+   P       STR++GT+
Sbjct:   49 LQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSY--FQP---LSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTY 245          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27
Identity = 64/172 (37.21%), Postives = 104/172 (60.47%), Query Frame = 3
Query:  288 VPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSN 794
            V A S+ +L+     F  N L+GEG+ GRVY    + G   A+K++D+S   K   EEF   VS +S + H+N  +L+GYC +    +L YE+ ++GSLH  LH       ++P   L+W  R++IA+G AK +EYLHE   P ++H++I  SN+L+ ++   +++D+ L+N
Sbjct:  400 VKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDF--SKP---LTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLAN 566          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27
Identity = 80/228 (35.09%), Postives = 118/228 (51.75%), Query Frame = 3
Query:  141 GCCEEDDMHKAADNGNAYMVKSSAGTDG-------AYHASEAAPKGAQAVKVQPIE-VPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE---FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLS 791
            G   + + H+   NGNA  +   +           A   +EA+ K   +    P+  V   +V  L++ T +F    LIG G  G VY   L  G   A++KLD      EE   FL  V+ + R++H N VQL+G+C + + R+L +E+  NG+LHD+LH    +K       LSW  RV+IA+ AAK LEYLHE  DP  IHR+   +N+L+ DD    ++D  L+
Sbjct:  406 GSESKQESHEIDMNGNAMDLMHPSSIPPIKRVIAKATEPAEASLKRTTSKSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLK-----IELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLA 628          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27
Identity = 74/195 (37.95%), Postives = 110/195 (56.41%), Query Frame = 3
Query:  294 AISVDELKEITENFGTNAL------IGEGSYGRVYYGILKSGHAAAIKKLDA-----SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 845
            + S  ELK++T NF    +      +GEG +G VY G + +    A+KKL A     +++  ++F  ++ ++++ +HEN V+LLG+  DG    L Y +  NGSL D L    G       P LSW  R KIA GAA GL YLHE    H IHRDI  +N+L+ +D  AKI+DF L+  +   A  + ++R++GT
Sbjct:  168 SFSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-RTVAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSWNMRCKIAQGAANGLSYLHEN---HHIHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGT 352          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27
Identity = 68/176 (38.64%), Postives = 100/176 (56.82%), Query Frame = 3
Query:  324 TENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGT 845
            T+ F +   +G+G +G VY G L +G   A+K+L   S Q D EF  +VS+++RL+H N V+LLG+C +G  ++L YEF  N SL H I    K         +L+W+ R +I  G A+GL YLHE +   IIHRD+  SN+L+  +   K+ADF  +        R  + R+ GT
Sbjct:  350 TDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKR-------SLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGT 518          
BLAST of CK940034 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.155e-27
Identity = 68/180 (37.78%), Postives = 102/180 (56.67%), Query Frame = 3
Query:  312 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIXXSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF 848
            ++  T  F  +  +G G +G VY G L +G   AIK+L   S Q  EEF  +V +V++L+H N  +LLGYC+DG  ++L YEF  N SL   L   +  +      VL WQ+R KI  G A+G+ YLH  +   IIHRD+  SN+L+  D   KI+DF ++        + ++ R++GT+
Sbjct:  340 IEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRR------VLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTY 513          
The following BLAST results are available for this feature:
BLAST of CK940034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APK1A_ARATH2.314e-2734.02Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
ACCR2_ARATH2.314e-2738.01Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5457_ARATH3.947e-2736.07Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH3.947e-2735.29Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
APK1B_ARATH3.947e-2736.45Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
SRF4_ARATH5.155e-2737.21Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
SRF1_ARATH5.155e-2735.09Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
IRAK4_BOVIN5.155e-2737.95Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
CRK39_ARATH5.155e-2738.64Putative cysteine-rich receptor-like protein kinas... [more]
CRK25_ARATH5.155e-2737.78Cysteine-rich receptor-like protein kinase 25 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004742_C07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IIF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK940034 ID=CK940034; Name=CK940034; organism=Citrus sinensis; type=EST; length=849bp
GGGGATCGTCGTCTTATCCTGCGCACCTCACGCCGGCTCCAGAGTGATTC
ATTCAAAATATCCAGCTCGTTGCTTTTCTCTATATCTCAGCTAGCTTTCA
TAGAGGGGCATTATTGTGGCAGTGAATCATGAGCTGCTTCGGCTGTTGTG
AAGAAGATGATATGCATAAAGCTGCTGACAATGGCAATGCATACATGGTT
AAAAGTTCAGCAGGAACTGATGGAGCCTATCATGCATCTGAAGCAGCACC
TAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCATTGAAGTCCCAGCAATTT
CAGTGGATGAATTGAAGGAAATTACTGAGAACTTTGGGACTAATGCTTTG
ATTGGAGAAGGTTCATATGGAAGAGTATATTATGGGATTCTTAAAAGTGG
ACATGCTGCAGCAATAAAAAAGTTGGATGCCAGCAAGCAACCTGATGAGG
AGTTTTTAGCACAGGTTTCCATGGTATCAAGGTTGAAGCATGAAAACTTT
GTTCAGCTGCTCGGGTATTGTGTTGATGGGACTTCCCGTGTGCTTGCCTA
CGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAGGAAAG
GTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGCGAGTG
AAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCACGAGAAGGC
AGATCCTCATATTATCCATCGCGATATTANNNCCAGCAATGTACTAATTT
TTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCT
CCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTG
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