CX044093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.458e-16 Identity = 57/148 (38.51%), Postives = 77/148 (52.03%), Query Frame = -3 Query: 238 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 606 AV+V+ GT+ +G V+ + + GPTTV ++GL PG H +H YG+ +N ISTGP F P GA G L NI +EG+A I IPL G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 53 AVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGLT 200
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16 Identity = 54/148 (36.49%), Postives = 75/148 (50.68%), Query Frame = -3 Query: 238 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 606 AVAV+ GT+ +G V+ + E GPTTV ++GL PG H +H +G+ +N ISTGP F P G G L NI ++G+A I IPL G N+V+GR VVH S + + G +A G +GL+ Sbjct: 71 AVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLT 218
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16 Identity = 54/148 (36.49%), Postives = 76/148 (51.35%), Query Frame = -3 Query: 238 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 606 AVAV+ GT+ +G V+ + + GPTTVK ++GL PG H +H +G+ +N +STGP F P G G L NI + G+A + IPL G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 70 AVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 217
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.006e-15 Identity = 47/120 (39.17%), Postives = 67/120 (55.83%), Query Frame = -3 Query: 292 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHS 615 ++ AVAVI G N KG++ F + +G T VKG ++GL PG H IH G+ +N STGP F P D G L N+ ++G+A + T IPL G +S++GR +VVH+ Sbjct: 3 VIKAVAVINGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHA 122
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.241e-15 Identity = 51/128 (39.84%), Postives = 66/128 (51.56%), Query Frame = -3 Query: 265 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP-----AGAD------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVHSSPSPDPGDG 612 + AV V+ GT GTV F GP T+KGS++GL PG H +H +G+ +N IS GP + P G D G L N+ G+A FEI + + L G S+IGR LVVH D G G Sbjct: 1 MKAVCVLKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEK-EDDLGKG 127
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.517e-15 Identity = 57/148 (38.51%), Postives = 74/148 (50.00%), Query Frame = -3 Query: 238 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 606 AVAV+ G + +G V+ + E PTTV ++GL PG H +H YG+ +N ISTGP F P GA G L NI + G+A I IPL G NSVIGR LVVH S + + G +A G +GL+ Sbjct: 53 AVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLT 200
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 54/148 (36.49%), Postives = 75/148 (50.68%), Query Frame = -3 Query: 238 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP------AGAD-----GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 606 AVAV+ G + +G V+ S + GPTTV ++GL PG H +H YG+ +N +STG F P A D G L NI ++G+A + IPL G NSV+GR LVVH S + + G +A G +GL+ Sbjct: 68 AVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 215
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.520e-14 Identity = 56/148 (37.84%), Postives = 73/148 (49.32%), Query Frame = -3 Query: 238 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP----AGAD-------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 606 AVAV+ GT+ G V+ E GPTTV ++GL PG H +H YG+ +N ISTG F P GA G L NI +G+A I IPL G+NSV+GR VVH S + + G +A G +GL+ Sbjct: 67 AVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 214
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 51/129 (39.53%), Postives = 65/129 (50.39%), Query Frame = -3 Query: 262 NAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVHSSPSPDPGDGV 609 N +AV+ G N G + F E G PTT+ G + GL PG H +H YG+ +N IS GP F P G L NI ++G A +I K + L G NS+IGR LVVH+ D G GV Sbjct: 4 NRIAVLRGDNV-SGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHAD-QDDLGKGV 130
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.230e-13 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = -3 Query: 292 MVNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKTI-PLFGTNSVIGRGLVVHS 615 MVNA+ +I G G +G V+ S E G P + G++SGL PG H + +H +G+ SN IS G + P + G L NI S G+AT I TI LFG SV+GR +V+HS Sbjct: 1 MVNAIVIIKGL-GVEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIHS 120 The following BLAST results are available for this feature:
BLAST of CX044093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044093 ID=CX044093; Name=CX044093; organism=Citrus sinensis; type=EST; length=659bpback to top |