CK940008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_CERDE (Photosystem I assembly protein ycf3 OS=Ceratophyllum demersum GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.983e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_CALFG (Photosystem I assembly protein ycf3 OS=Calycanthus floridus var. glaucus GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.983e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_BUXMI (Photosystem I assembly protein ycf3 OS=Buxus microphylla GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.983e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 M RSRINGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MSRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_AMBTC (Photosystem I assembly protein ycf3 OS=Amborella trichopoda GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.983e-16 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_SORBI (Photosystem I assembly protein ycf3 OS=Sorghum bicolor GN=ycf3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 209 MPRSRINGNFIDKT SIVANILL+IIPTT GEK AFTYYRDGAI Sbjct: 1 MPRSRINGNFIDKTSSIVANILLQIIPTTSGEKRAFTYYRDGAI 44
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_SINAL (Photosystem I assembly protein ycf3 OS=Sinapis alba GN=ycf3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 MPRSRINGNFIDKTF+IVA+ILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_BRAJU (Photosystem I assembly protein ycf3 OS=Brassica juncea GN=ycf3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 MPRSRINGNFIDKTF+IVA+ILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_ARATH (Photosystem I assembly protein ycf3 OS=Arabidopsis thaliana GN=ycf3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 MPRSRINGNFIDKTF+IVA+ILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFTIVADILLRVIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_CUSEX (Photosystem I assembly protein ycf3 OS=Cuscuta exaltata GN=ycf3 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.703e-15 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 M RSRINGNF+DKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MSRSRINGNFLDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of CK940008 vs. ExPASy Swiss-Prot
Match: YCF3_SOLTU (Photosystem I assembly protein ycf3 OS=Solanum tuberosum GN=ycf3 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 3 Query: 78 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 203 MPRSR NGNFIDKTFSIVA+ILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRTNGNFIDKTFSIVADILLRVIPTTSGEKEAFTYYRDG 42 The following BLAST results are available for this feature:
BLAST of CK940008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CK940008 ID=CK940008; Name=CK940008; organism=Citrus sinensis; type=EST; length=285bpback to top |